Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1537 ATGGGTGTGGACTACTACAAAATTCTTCAGGTAGATCGAAGTGCAAAAGATGATGATCTCAAGAAAGCGTATCGGAAGCTTGCAATGAAGTGGCACCCTGACAAGAACCCTAACAACAAGAAAGAAGCTGAGGCCAAATTCAAGGAAATCTCTGAAGCCTATGATGTTTTGAGTGACCCACAGAAGAGGGCGGTGTATGATCAGTATGGTGAGGAGGGATTGAAAGGGCAGGTGCCACCCCCGGGAGCTGGTGGATTTGCTGGTGGAGGAGGCGATGGTGGGCCTACGACGTTCCGGTTCAACCCTAGAAGTGCTGATGACATATTCTCTGAGTTTTTCGGGTTCTCAAGCCCCTTTGGTGGAATGGGGGATATGGGTGGCCGTGCTGGTGCATCTGGATTCCCCAGGGGCATGTTTGGGGAGGACATCTTCAACTCATTTCGGAGTGGAGCTGGAGAAGGCTCTGCCAATATGCCAAGGAAGAGTGCACCCATTGAGAGAACATTGCAGTGCAGTTTGGAGGACTTATACAAAGGAACCACCAAAAAGATGAAGATCTCAAGGGATGTTACTGATGCCAGTGGGAGACCCACCACAGTCGAGGAAATTCTGACAATTGAGATCAAGCCAGGTTGGAAGAAAGGAACAAAGATAACTTTCCCGGAGAAGGGTAATGAACAGAGAGGAGTTATACCTGCTGACCTTGTTTTTATTATCGATGAGAAGCCTCATGGCGTCTTCAAGAGGGACGGCAACGATCTTGTTGTCACACAGAAGATTTCTCTCGTGGAAGCTCTGACAGGTTACACGGCGCAATTGACAACCCTTGATGGGCGGAGCCTTTCAATTCCCATCAACTCCATCATCAGTCCAACATATGAAGAAGTTATTAAAGGAGAGGGTATGCCTATCCCCAAGGAGCCTTCCAAAAGGGGAAACTTGAGAATCAAGTTCAACATTAAGTTTCCTTCCAGGCTTACACCAGAGCAGAAAGCCGGCATTAAGCGATTATTGACCTCTCCATAA 1026 0.4795 MGVDYYKILQVDRSAKDDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKEISEAYDVLSDPQKRAVYDQYGEEGLKGQVPPPGAGGFAGGGGDGGPTTFRFNPRSADDIFSEFFGFSSPFGGMGDMGGRAGASGFPRGMFGEDIFNSFRSGAGEGSANMPRKSAPIERTLQCSLEDLYKGTTKKMKISRDVTDASGRPTTVEEILTIEIKPGWKKGTKITFPEKGNEQRGVIPADLVFIIDEKPHGVFKRDGNDLVVTQKISLVEALTGYTAQLTTLDGRSLSIPINSIISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSRLTPEQKAGIKRLLTSP* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1537 341 MobiDBLite consensus disorder prediction 73 97 - -
Dod07g1537 341 CDD DnaJ 4 59 IPR001623 -
Dod07g1537 341 SMART dnaj_3 3 62 IPR001623 -
Dod07g1537 341 SUPERFAMILY HSP40/DnaJ peptide-binding domain 246 332 IPR008971 GO:0006457|GO:0051082
Dod07g1537 341 Pfam DnaJ C terminal domain 165 323 IPR002939 -
Dod07g1537 341 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 339 - -
Dod07g1537 341 Gene3D - 244 324 - -
Dod07g1537 341 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Dod07g1537 341 Gene3D DnaJ domain 3 124 IPR036869 -
Dod07g1537 341 Pfam DnaJ domain 4 67 IPR001623 -
Dod07g1537 341 CDD DnaJ_C 163 326 - -
Dod07g1537 341 SUPERFAMILY HSP40/DnaJ peptide-binding domain 165 244 IPR008971 GO:0006457|GO:0051082
Dod07g1537 341 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Dod07g1537 341 Gene3D - 164 242 - -
Dod07g1537 341 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 339 - -
Dod07g1537 341 PRINTS DnaJ domain signature 24 39 IPR001623 -
Dod07g1537 341 PRINTS DnaJ domain signature 62 81 IPR001623 -
Dod07g1537 341 PRINTS DnaJ domain signature 6 24 IPR001623 -
Dod07g1537 341 PRINTS DnaJ domain signature 42 62 IPR001623 -
Dod07g1537 341 SUPERFAMILY Chaperone J-domain 3 100 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1537 Dod-Chr7 41735853 41739683 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1537 5 146 C2H2 Transcription Factor Family AT1G74250 31.081 3.73e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1537 K09510 - nnu:104602593 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1537 07 41735853 41739683 Dod07g1537 07 41735853 41739683 ECH