Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1524 ATGGGGTCTATCAGAGACCAAGAACCATGGCTTTTAGAGAATGGCAACATTAAGGTGCTGAGCAAGGAGATGAGACATGGAAGGACAGCACATAATATGTCATCATCATCCCTGCGCAAGAAATCTGACCTCACTCTTGTGTCCAAGATTCGCTATGGATTCCTCAGAAACTTGCTTACTAACTTGCAAGAGGTCATTCTTGGAACCAAGCTCTTCATTCTGTTCCCAGCCATTCCTTTAGCTATCATTGCTGAATGCTTTGGCTTTGCTAGACCTTGGATCTTTGCTTTGAGCTTACTTGGGCTAACTCCACTTACTGAAAGAGTCAGCTTCCTGACTGAGCAAGTTGCCTTTTACACAGGTCCTACAGTTGGAGGACTTTTGAATGCTACATGTGGGAATGCTACAGAGCTAATCATAGCAATTTTTGCACTTAGTAACAACAAAATTGCTGTGGTTAAGTATTCTCTACTTGGTTCCATACTTTCAAACCTTCTTCTGGTTCTTGGAACCTCTCTATTTTGTGGTGGCATTGCAAACGTTAGGCATGAGCAAAAATATGACAGAAGGCAGGCTGATGTGAACTCACTTATGCTGCTTCTGGCATTGTTGTGCCACTTGCTCCCAATGCTGTTCAGATATGGCAGCGACTCGGCAGCTATCATCGCAGACTCATCTTTGCATTTGTCCAGAGCTGCTAGCATTGTGATGCTGATTGCTTATTTTGCTTACCTTATCTTCCAAATATGGACTCACCGGCAATTATTTGAAGCACAAGAAGATGATGGCGAAGAGGGTGAAAATGCTTCAGAAGCAGCAGTAATAGGATTCTGCAGTGGGATTGTTTGGCTGGTTGGGATGACTCTAGTCATTGCTTTGTTGTCTGAATATGTGGTGGAAACTATAGAGGATGCATCAGATTCATGGGGTTTGTCTGTAAGCTTCATCAGCATAATCTTGCTACCAATAGTTGGCAATGCAGCTGAACATGCAGGAGCTATCATTTTTGCTTTCAAGAACAAGCTGGACATCTCATTGGGTGTTGCTTTGGGTTCAGCAACTCAAATTAGCATGTTTGTGGTTCCCCTATGTATCATTGTTGCTTGGATTCTTGGTATCAAAATGGACCTCAACCTCAACCTCATAGAGACAGGTTCTCTTGCTTTGTCAATAATTGTCACGGCCTTCACATTACAGGATGGAACTTCTCACTACATGAAAGGCCTTGTTCTCCTTCTCTGCTACATTGTTATTGGGGCCTGCTTTTTTGTCCAGAGAACACCCTATAATCAAGATGAGGTTGTTACTAAAGGGATGCTTAATTCAGCAACTGATGCCGTTTTAAGATCTTAA 1353 0.4272 MGSIRDQEPWLLENGNIKVLSKEMRHGRTAHNMSSSSLRKKSDLTLVSKIRYGFLRNLLTNLQEVILGTKLFILFPAIPLAIIAECFGFARPWIFALSLLGLTPLTERVSFLTEQVAFYTGPTVGGLLNATCGNATELIIAIFALSNNKIAVVKYSLLGSILSNLLLVLGTSLFCGGIANVRHEQKYDRRQADVNSLMLLLALLCHLLPMLFRYGSDSAAIIADSSLHLSRAASIVMLIAYFAYLIFQIWTHRQLFEAQEDDGEEGENASEAAVIGFCSGIVWLVGMTLVIALLSEYVVETIEDASDSWGLSVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQISMFVVPLCIIVAWILGIKMDLNLNLIETGSLALSIIVTAFTLQDGTSHYMKGLVLLLCYIVIGACFFVQRTPYNQDEVVTKGMLNSATDAVLRS* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1524 450 TIGRFAM cax: calcium/proton exchanger 76 423 IPR004798 GO:0006816|GO:0015369
Dod07g1524 450 Gene3D - 269 423 IPR044880 -
Dod07g1524 450 Gene3D - 122 262 IPR044880 -
Dod07g1524 450 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 3 435 IPR004713 GO:0006812|GO:0008324|GO:0016021
Dod07g1524 450 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 3 435 - -
Dod07g1524 450 TIGRFAM caca2: calcium/proton exchanger 57 423 - -
Dod07g1524 450 Pfam Sodium/calcium exchanger protein 281 418 IPR004837 GO:0016021|GO:0055085
Dod07g1524 450 Pfam Sodium/calcium exchanger protein 92 250 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1524 Dod-Chr7 41583986 41588316 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1524 8 437 Antiporters AT2G38170 73.121 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1524 K07300 - gmx:100779440 671.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1524 07 41583986 41588316 Dod07g1524 07 41583986 41588316 ECH
Dod01g1107 01 21908939 21913196 Dod07g1524 07 41583986 41588316 PCT