Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1522 ATGGCAGGTCTAGTGGTTGCAAATGGGAACGGATCATTGAACTTGAAGCCAAATGAGACCAATGGAAAGACCATTACTTGTAAAGCTGCCGTGGCATATGGTCCTGGAATGCCCTTGGTTGTGGAGCAAGTTCTTGTTCACCCTCCTCAGAAAATGGAGGTTCGGATCAAGATCCTCTTCACTTCAATATGTCACACCGATTTAAGTGCTTGGCTAGGCGAGAATGAAACTCAGCGTGCTTATCCTCGGATTTTAGGCCATGAAGCATCCGGGATTGTGGAGAGTGTGGGAGAAGGTGTGAGTGACATGAAAGAAGGGGACTTAGTGGTGCCAATTTTCAATGGGGAATGTGGTGATTGTCCCTATTGCAAATGTGAGCAAACCAACAAGTGTGAGAGGTTTGGTGTAGATGCCATGAAAAAAGTTATGGCTTGTGATGGCACATCAAGGTTTTCAACCATTGATGGCAAACCCATTTTCCATTTCTTGAACACTTCAACTTTCACTGAGTACACGGTTGTGGAGTCAGCATGTGTTGTGAAGCTTCCCTCTGGTGGTGATGGTGACCTCCATTCATACCTAAAGAGGCTCACATTACTCAGTTGTGGTGTATCCACAGGTGTGGGAGCTGCTTGGAATACCGCTAATGTGCATTCTGGTTCAACTGTAGCCATCTTTGGTTTAGGTGCTGTGGGCCTCGCTGTTGCGCAGGGGTCACGAGCTAGAGGTGCATCCAAAATTATAGGAGTTGACATCAACCCTGACAAATTCATCAAAGCCCGAGCAATGGGTGTCACTGACTTCATAAATCCAAGGGATGAAGAGAAGCCAACATATGAGATAATGAGGGAAATCACTGGTGGTGGAGGAGTGCACTACAGTTTTGAATGTGCAGGAAACTTGAATGTTCTAAGAGATGCCTTCTTGTCTTCTCATGAGGGCTGGGGATTGACTGTGTTATTGGGAATTCATCCATCACCAAAAATGCTTCCAATTCACCCAATGGAGCTTTATGAAGGTCGTAGAATAGTAGGATCAGTTTTTGGAGGCTTCAAAGGGAAGACTCAACTGCCACATTTTGCCAAAGAGTGCATGCATGGGGTGGTGAAGCTAGACGATTTTATCACTCACGAGCTTCCCTTTGAGGAGATAAACAAAGCCTTTGATCTTTTGAGCACTGGAAAGTCACTGAGATGTCTTCTATACATCTAA 1212 0.453 MAGLVVANGNGSLNLKPNETNGKTITCKAAVAYGPGMPLVVEQVLVHPPQKMEVRIKILFTSICHTDLSAWLGENETQRAYPRILGHEASGIVESVGEGVSDMKEGDLVVPIFNGECGDCPYCKCEQTNKCERFGVDAMKKVMACDGTSRFSTIDGKPIFHFLNTSTFTEYTVVESACVVKLPSGGDGDLHSYLKRLTLLSCGVSTGVGAAWNTANVHSGSTVAIFGLGAVGLAVAQGSRARGASKIIGVDINPDKFIKARAMGVTDFINPRDEEKPTYEIMREITGGGGVHYSFECAGNLNVLRDAFLSSHEGWGLTVLLGIHPSPKMLPIHPMELYEGRRIVGSVFGGFKGKTQLPHFAKECMHGVVKLDDFITHELPFEEINKAFDLLSTGKSLRCLLYI* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1522 403 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 86 100 IPR002328 GO:0008270|GO:0016491
Dod07g1522 403 Pfam Alcohol dehydrogenase GroES-like domain 53 180 IPR013154 -
Dod07g1522 403 SUPERFAMILY GroES-like 353 402 IPR011032 -
Dod07g1522 403 Pfam Zinc-binding dehydrogenase 230 351 IPR013149 -
Dod07g1522 403 Gene3D - 30 398 - -
Dod07g1522 403 PANTHER ALCOHOL DEHYDROGENASE 20 402 - -
Dod07g1522 403 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 197 367 IPR036291 -
Dod07g1522 403 SUPERFAMILY GroES-like 20 189 IPR011032 -
Dod07g1522 403 Gene3D - 207 346 - -
Dod07g1522 403 PANTHER ALCOHOL DEHYDROGENASE-LIKE 3 20 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1522 Dod-Chr7 41566513 41572775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1522 53 392 Monolignol Biosynthesis Gene Families AT2G21730 27.697 5.15e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1522 K00001 - gmx:100787307 684.1