Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1521 ATGTCCATTTATGAAAGGAAAGCCAGTCTGAAGGAGTTCTATGGTGTGATCTTTCCTTCTTTATTACAACTCCAGAGAGGCATCACTGATGTAGAAGACAGGAAACAGAAAGATATATGTGCTACAAAGTACAAGCCGTGGGATATGGCTGGAAAAGGAAAATTATCTGAGGTTGATGTAGAGAGAGAGGAAGAATGTGGAATTTGCCTGGAGATGAACAACAAGGTTGTGTTGCCCAGTTGCTACCATTCAATGTGTATAAAATGCTATCGAGATTGGCACGCGCGATCGCAGTCTTGCCCTTTCTGTCGGAGCAGTCTTAAAAGAGTGAACTCCGGCGACCTCTGGATCTACATGAGCCCCAGTGATGTAGATGACTTGGCTTCAATCAACAAGGAGAACTTAAAGAGGCTGTTTATGTACATTGACAAGTTGCCTCTAATTACGCCAGATCCTATATTCATGTCTTATCCTCAGCGTTTTTGA 486 0.428 MSIYERKASLKEFYGVIFPSLLQLQRGITDVEDRKQKDICATKYKPWDMAGKGKLSEVDVEREEECGICLEMNNKVVLPSCYHSMCIKCYRDWHARSQSCPFCRSSLKRVNSGDLWIYMSPSDVDDLASINKENLKRLFMYIDKLPLITPDPIFMSYPQRF* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1521 161 SMART ring_2 66 103 IPR001841 -
Dod07g1521 161 ProSiteProfiles Zinc finger RING-type profile. 66 104 IPR001841 -
Dod07g1521 161 ProSitePatterns Zinc finger RING-type signature. 81 90 IPR017907 -
Dod07g1521 161 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 52 113 IPR013083 -
Dod07g1521 161 SUPERFAMILY RING/U-box 56 109 - -
Dod07g1521 161 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 1 149 - -
Dod07g1521 161 PANTHER RING FINGER PROTEIN 41, 151 1 149 - -
Dod07g1521 161 Pfam Zinc finger, C3HC4 type (RING finger) 63 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1521 Dod-Chr7 41543144 41544383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1521 10 108 C3H Transcription Factor Family AT5G01960 28.846 1.52e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1521 K25840 - gmx:100819267 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1521 07 41543144 41544383 Dod07g1521 07 41543144 41544383 ECH