Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1518 ATGTCCGCAACCGCGACTGCAGCCACATCATCTTTCATTGGGACACGTCTCTTAGAGACATATCCCAGTTCAGGCAGGGTCCAAGCCCGATTCGGATTTGGACCCAAGAAGAAGAGCCCATCAAAGAAGGTCTCAAGGCCCAACTTGGACAGGCCACTCTGGTTCCCCGGTGCCAAGGCTCCTGAGTGGCTGGACGGGAGCCTGATAGGGGACTATGGGTTTGACCCGTTCGGGCTGGGGAAGCCGGCAGAGTACTTGCAGTTCGAGCTGGACTCGTTGGACCAGAACCTGGCCAAGAACCCAGCCGGGGACGTGATCGGGACAAGGACGGAGGTGGCGGACGTGAAAGCGACGCCGTTTCAGCCGTACAGTGAGGTTTTCGGGCTTCAGAGGTTCAGGGAGTGTGAGCTTATACATGGGAGGTGGGCCATGCTGGCCACGCTCGGTGCACTCACAGTGGAATGGCTCACCGGAGTTACATGGCAAGATGCTGGGAAGGTGGAGCTAGTAGAAGGGTCATCATACTTGGGGCAACCACTTCCATTCTCAATCACCACACTGATTTGGATTGAGGTTCTTTTGATTGGGTACATTGAGTTCCAGAGGAATGCTGAGCTTGACCCAGAGAAGAGGCTGTACCCAGGTGGCAAGTTCTTTGACCCACTTGGCTTGGCTGCTGACCCTGAGAAGAAGGCCAGACTTCAATTGGCAGAGATCAAGCATGCACGCCTTGCCATGGTTGGCTTCTTGGGCTTTGCGGTCCAAGCTGCTGCAACTGGCAAAGGCCCACTCAACAACTGGGCTACCCATTTGAGTGACCCTCTTCACACAACCATCATTGACACCTTCTCATCCTCCTCTTGA 864 0.5521 MSATATAATSSFIGTRLLETYPSSGRVQARFGFGPKKKSPSKKVSRPNLDRPLWFPGAKAPEWLDGSLIGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNPAGDVIGTRTEVADVKATPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLLIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAADPEKKARLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSSS* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1518 287 SUPERFAMILY Chlorophyll a-b binding protein 44 284 - -
Dod07g1518 287 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.2, CHLOROPLASTIC 1 286 - -
Dod07g1518 287 Gene3D Chlorophyll a/b binding protein domain 54 287 - -
Dod07g1518 287 Pfam Chlorophyll A-B binding protein 60 256 IPR022796 -
Dod07g1518 287 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 286 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1518 Dod-Chr7 41506942 41509667 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1518 12 286 Chloroplast and Mitochondria Gene Families AT3G08940 85.507 1.24e-173 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1518 K08915 - qsu:112006359 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1518 07 41506942 41509667 Dod07g1518 07 41506942 41509667 ECH