Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1495 ATGGAGGGAAAAGATGAAGATGTGAGAGTTGGAGCCAATAGGTATAGAGAGAGGCAACCAATAGGAACTGCTGCTCAGGCCCAAGATGGTGGAAGGGACTACAAGGAGCCACCTTCAGCACCATTCTTTGAGCCCGGTGAGTTGTCATCATGGTCTTTCTATAGGGCAGGCATTGCGGAGTTTGTGGCCACGTTCTTGTTCCTTTACATCACTGTCTTAACGGTGATGGGTGTGGCCAAATCAAACAGCAAGTGCTCCACGGTTGGTGTCCAAGGCATTGCTTGGGCATTTGGTGGAATGATCTTTGCTCTCGTCTATTGCACTGCTGGTATCTCAGGGGGTCATATTAACCCAGCAGTGACTTTTGGGCTGTTCTTGGCACGCAAGCTCTCTCTGACAAGGGCAGTTTTTTACATAATTATGCAGTGTTTGGGAGCTATATGTGGTGCTGCCGTGGTTAAGGGATTCCAACCACGCCAATATGAGAGGCTTGGAGGTGGTGCCAACACTCTGAGCAAAGGGTTCTCCAAAGGTGATGGCCTTGGAGCAGAGATTGTTGGCACTTTTGTGCTTGTTTATACTGTCTTCTCTGCTACTGATGCCAAGCGAAATGCTAGGGACTCCCACGTTCCTATTCTGGCACCTCTGCCTATTGGTTTTGCTGTCTTTTTGGTGCATTTGGCTACAATTCCTATTACTGGGACCGGCATCAACCCAGCTAGAAGTCTAGGTGCAGCCCTTGTATACAACAAGGACCAGGCCTGGGACGACCATTGGATTTTCTGGGTAGGACCTTTCACTGGGGCAGCACTTGCAGCCTTGTACCATCAAATAATGATAAGGGCCATTCCCTTCAAGCCATCAAAGTGA 870 0.4908 MEGKDEDVRVGANRYRERQPIGTAAQAQDGGRDYKEPPSAPFFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVAKSNSKCSTVGVQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGAAVVKGFQPRQYERLGGGANTLSKGFSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALVYNKDQAWDDHWIFWVGPFTGAALAALYHQIMIRAIPFKPSK* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1495 289 TIGRFAM MIP: MIP family channel proteins 59 276 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod07g1495 289 CDD MIP 55 279 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod07g1495 289 Pfam Major intrinsic protein 47 276 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod07g1495 289 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 287 IPR034294 -
Dod07g1495 289 SUPERFAMILY Aquaporin-like 48 281 IPR023271 -
Dod07g1495 289 PANTHER PLASMA MEMBRANE INTRINSIC PROTEIN 1 287 - -
Dod07g1495 289 ProSitePatterns MIP family signature. 115 123 IPR022357 -
Dod07g1495 289 Gene3D Glycerol uptake facilitator protein. 40 286 IPR023271 -
Dod07g1495 289 PRINTS Major intrinsic protein family signature 97 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod07g1495 289 PRINTS Major intrinsic protein family signature 134 153 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod07g1495 289 PRINTS Major intrinsic protein family signature 219 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod07g1495 289 PRINTS Major intrinsic protein family signature 183 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod07g1495 289 PRINTS Major intrinsic protein family signature 259 279 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod07g1495 289 PRINTS Major intrinsic protein family signature 55 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1495 Dod-Chr7 40928290 40931913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1495 1 286 Major Intrinsic Protein MIP AT3G61430 84.266 7.93e-176 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1495 K09872 - jre:108995176 535.413