Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1490 ATGGAGGACTTGATAATCTCTCCTTCTTCATCATCCTCTCTTGTGTCTCTCGCCCACGAAAACACACAGCCAACCCTTCAGCAAAAGCTTCAATTCCTTCTCCAGAACCAACCAGATTGGTGGGTCTACGCCATCTTCTGGCAGACAACTCATGATGACAATGGGAACATGTTTCTTTCATGGGGAGATGGCCATTACCAAGGTGCCAAAGACATGTCCCCGAAGCTTCTCCAGCACATGAACATGAACGCTGCCAATTCCCATTACCCCGTTCCGGCGGAGAGAAGGAATAAATTCGCCAAAGGAATCCAATCCCTCATCATGGATGACAACACAAACAACATGTGCAACGACGTCGAGTGGTTCTACGTCATGTCGTTGACACGCACATTCTCTGTTGGCGACGCTTCTTATTCTCTCCCAGGGAAGGCATTCACTTCGGGTTCTCTCATCTGGCTAAAGAGCGATCAGCACGAGCTTCAGTTCTGCAACTGCGAGAGAGCCAAAGAAGCTTACATGCATGGGATTCAGACACTCACCTGCATCCCCACAAGTGACGGCGTTCTCGAAATGGGTTCCTGTGGCCACGTCACAGAAAACTGGGGTCTGATCCACCAAGTCAAGTCACTTTTTGAATCAGACCCCATTGACATTGGTGGCATGCCGCCGAATAATAAGCAGCTAAACCCTATACAATTCTTGGACGACCAGAATTTCTCCTTCGCGGACATCGGCATTATAGCCGGTGTTCAAGAAGAAGATAATTCCCTTGACAATGATCTGAAAAGAAAAGATATTAGGGGACCTAATTGTACCAACAACAACAAGAAGAAGGACTCGCTGGCGAAGTTCGGGTCGCGCCAATCATCCTACGTGGATTCTGAGCATTCGGACTCTGACTGTGCACCAATGGCGGCGGAGAAAAGATTGCCGAAGAAGAGAGGGAGAAAACCGGGGCTCGGCCGTGAAACTCCACTGAACCACGTGGAAGCGGAGCGGCAGAGAAGGGAGAAGCTCAACCACCGTTTCTACGCTTTGAGGGCGGTGGTGCCGAACGTGTCGAGGATGGACAAGGCTTCGCTGTTGTCCGATGCTGTGGCTTACATCAACGAGCTGAAAGCGAAGATCGAAGAGTTGGAGGGGCAGTTGCAAAAGGAGTCTTCGGGCAAGAAGGTGAAGGTGGAAATGGGTGACAACATGGACAACCAGAGCACCACAACATCCTCGGTGGAACAAACGGGAGGTTCCAACAATAATAATAACCAGAACAACAATAACAATATTGATGACAATGGGTTCGCGATCGAGGTGGAGGTTAAGATGTTAGGGGGAGATGCAATGGTGAGGGTTCAGTCGGAGAGTGGCAGCCATCCAGGGGCGAGGTTGATGAGTGCATTGCGGGAATTGGAGTTTCATGTCCACCATGCCAGCATGTCCTGCGTTAACGAACTCATGCTTCAACATGTGTTGGTTAAGGTTCCTGAAGGCATGACAACCGAAGAAAGTGTTAAATCTGCTATTCTCAGGAGATTGGATCAGTAG 1542 0.4961 MEDLIISPSSSSSLVSLAHENTQPTLQQKLQFLLQNQPDWWVYAIFWQTTHDDNGNMFLSWGDGHYQGAKDMSPKLLQHMNMNAANSHYPVPAERRNKFAKGIQSLIMDDNTNNMCNDVEWFYVMSLTRTFSVGDASYSLPGKAFTSGSLIWLKSDQHELQFCNCERAKEAYMHGIQTLTCIPTSDGVLEMGSCGHVTENWGLIHQVKSLFESDPIDIGGMPPNNKQLNPIQFLDDQNFSFADIGIIAGVQEEDNSLDNDLKRKDIRGPNCTNNNKKKDSLAKFGSRQSSYVDSEHSDSDCAPMAAEKRLPKKRGRKPGLGRETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVAYINELKAKIEELEGQLQKESSGKKVKVEMGDNMDNQSTTTSSVEQTGGSNNNNNQNNNNNIDDNGFAIEVEVKMLGGDAMVRVQSESGSHPGARLMSALRELEFHVHHASMSCVNELMLQHVLVKVPEGMTTEESVKSAILRRLDQ* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1490 513 Coils Coil 362 389 - -
Dod07g1490 513 SMART finulus 329 378 IPR011598 GO:0046983
Dod07g1490 513 MobiDBLite consensus disorder prediction 382 430 - -
Dod07g1490 513 PANTHER MYC 1 511 IPR045084 GO:0003700|GO:0006355
Dod07g1490 513 PANTHER TRANSCRIPTION FACTOR BHLH14 1 511 - -
Dod07g1490 513 CDD bHLH_AtAIB_like 321 391 - -
Dod07g1490 513 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 315 384 IPR036638 GO:0046983
Dod07g1490 513 MobiDBLite consensus disorder prediction 260 334 - -
Dod07g1490 513 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 26 211 IPR025610 -
Dod07g1490 513 MobiDBLite consensus disorder prediction 273 296 - -
Dod07g1490 513 Pfam Helix-loop-helix DNA-binding domain 327 372 IPR011598 GO:0046983
Dod07g1490 513 MobiDBLite consensus disorder prediction 382 397 - -
Dod07g1490 513 MobiDBLite consensus disorder prediction 398 430 - -
Dod07g1490 513 MobiDBLite consensus disorder prediction 317 334 - -
Dod07g1490 513 Gene3D - 321 387 IPR036638 GO:0046983
Dod07g1490 513 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 323 372 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1490 Dod-Chr7 40835440 40837800 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1490 26 513 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G17880 34.657 1.15e-88 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod07g1490 bHLH-MYC_N 3.8e-49 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1490 - K13422 adu:107491832 580.867