Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1443 ATGGAACCTCCTGAAGAAACCTCCCTCGCCGTCGTCGACACCGACGGAGCCACCGCAGCAGTAGGGGGCAGTGCCGACGCCGGAAGCGGCGACGAGGCCCTGACGGGTTTAGCCGAAGCAGAGGCAGGAGCTGGAGGAGAAGGAGAAGGAGAAGGAGGTAGCAATGGTGGTGGTGGTGGTGGTGGAAGCAGTAGCAGCAACAGGGACAGAGTGAAGGGTCCTTGGTCTCCGGAAGAGGACGCGATTCTGAGCCGTCTGGTGAGCAAGTTCGGCGCCAGGAACTGGAGCCTCATCGCCCGCGGCATCGCCGGCAGATCCGGCAAGTCCTGCCGCCTCCGCTGGTGCAACCAGCTCGACCCCGCCGTCAAGCGCAAGCCCTTTACCGATGAGGAGGACCGGATCATAGTTACTGCTCATGCAATCCATGGGAACAAATGGGCAGCCATCGCCAGGCTTCTACCAGGAAGAACAGATAATGCCATCAAGAACCACTGGAATTCAACTTTGAGGCGTCGGGGAGTTGAACATGATAGGGTTAAGTTAGAATCTAGCAATATGGTGGAGGATGTTAGCTTTGACAAAGCGAAAGCATCATCTGAAGAGACACTGTCATGTGGAGATGTTAATTCCTTGAGATCCTCTGAAGGAAGAGATGTTAGTTCTGTGGAGGTCATGGATGATAAATATGAAGATGGAGCACGAACTGAGGGTCAATTGTATCATGAAGTCAAGGATCCACCCACCCTTTTTCGGCCGGTGGCACGTGTCAGTGCTTTTAGTGTATATCACTCTATTGATGGTTTACAGCCTTCAACCTCAACACAGAGACCAGTTCCAATGCAAGGACCCAATTTACAATCATCAAAACCAGATATTGAAATTTGCAAAATGCTTGAAGGAATTTATGGTGACCAATCAGTGCCTCACCAGTGTGGCCACGGTTGCTGTGCCGCTCCAAATGATAAGAAGTCTAAAAGCTCTTTGTTAGGACCAGAATTCATTGAATTTTCAGAACCCCCATCTTTCCCAAGTTTTGAGTTGGCTGCAATAGCTACAGACATTAGTAACCTTGCTTGGCTTAAAAGTGGATTAGAGAACAGCAGTGTCAAAATAATGGGGGACACAGCTGGCAGGGTAATTTCTAATGGCTCTCAAGTGCATATTGGCCACTAG 1173 0.5055 MEPPEETSLAVVDTDGATAAVGGSADAGSGDEALTGLAEAEAGAGGEGEGEGGSNGGGGGGGSSSSNRDRVKGPWSPEEDAILSRLVSKFGARNWSLIARGIAGRSGKSCRLRWCNQLDPAVKRKPFTDEEDRIIVTAHAIHGNKWAAIARLLPGRTDNAIKNHWNSTLRRRGVEHDRVKLESSNMVEDVSFDKAKASSEETLSCGDVNSLRSSEGRDVSSVEVMDDKYEDGARTEGQLYHEVKDPPTLFRPVARVSAFSVYHSIDGLQPSTSTQRPVPMQGPNLQSSKPDIEICKMLEGIYGDQSVPHQCGHGCCAAPNDKKSKSSLLGPEFIEFSEPPSFPSFELAAIATDISNLAWLKSGLENSSVKIMGDTAGRVISNGSQVHIGH* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1443 390 ProSiteProfiles Myb-like domain profile. 119 169 IPR001005 -
Dod07g1443 390 SUPERFAMILY Homeodomain-like 69 165 IPR009057 -
Dod07g1443 390 Pfam Myb-like DNA-binding domain 75 132 - -
Dod07g1443 390 ProSiteProfiles Myb-like domain profile. 67 118 IPR001005 -
Dod07g1443 390 CDD SANT 74 116 IPR001005 -
Dod07g1443 390 PANTHER MYB PROTEIN-RELATED 38 367 - -
Dod07g1443 390 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 122 IPR017930 -
Dod07g1443 390 Gene3D - 126 172 - -
Dod07g1443 390 Gene3D - 71 123 - -
Dod07g1443 390 CDD SANT 126 169 IPR001005 -
Dod07g1443 390 PANTHER - 38 367 - -
Dod07g1443 390 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 123 173 IPR017930 -
Dod07g1443 390 SMART sant 71 120 IPR001005 -
Dod07g1443 390 SMART sant 123 171 IPR001005 -
Dod07g1443 390 MobiDBLite consensus disorder prediction 1 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1443 Dod-Chr7 39078314 39085293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1443 56 390 MYB Transcription Factor Family AT3G09230 51.594 1.17e-112 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod07g1443 Myb_DNA-bind_6 1.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1443 K09422 - gmx:100813406 560.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1443 07 39078314 39085293 Dod07g1443 07 39078314 39085293 ECH