Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1442 ATGTCAAGTGTTGAGATGTCACATGTGGATTTGGAGCAAGGGAATCACCACAACCGTTCTGTGACTGGGAGCACTGACATTAGCCTTTGCTTCTCTGATGCTGATGATGGTGGTTCCTGCTACTCTCATTTCTACTCCACAAATGGTGGCTCCTATGATGACTACAGCTTCTCCTGTGTCTCTGATCCTGAGGCTGCTGCTGATGAGGGTGTTGCTGATTCTGGGAGGGCTTCTTCTGCCACTGATTGTTCTGTTGAGGTGGAAATTGAAAGTGGGGTGCCTGAAGTCAAGGTGCATTTGGCCAAAGTGGAGAGGGATTGCAGGATTTGCCACCTTGGTTTGGAGAGTGATAGCCAAGAATCTGGTGTCCCCATTGAATTGGGGTGTTCTTGTAAGGATGATTTGGCAGCTGCTCACAAGAATTGTGCTGAGGCATGGTTCAAGATCAAGGGTAATAGGACCTGTGAAATTTGTCATTCTGTTGCAAGGAATGTTCATTCAGGAAATGAGGAGACAATAGAGACCTTGAGTGACAATAACAATGTCACTGCAGTAGCATCCACAATCTCAACACCTGGCCGTTCATCGGAACCTCGACGGTTCTGGCACGGCCATCGCTTCCTGAACTTTCTGCTTGCTTGTATGGTGTTTGCATTCGTCATATCATGGCTTTTCCACTTCAATGTGCCCTCATCATAA 699 0.4721 MSSVEMSHVDLEQGNHHNRSVTGSTDISLCFSDADDGGSCYSHFYSTNGGSYDDYSFSCVSDPEAAADEGVADSGRASSATDCSVEVEIESGVPEVKVHLAKVERDCRICHLGLESDSQESGVPIELGCSCKDDLAAAHKNCAEAWFKIKGNRTCEICHSVARNVHSGNEETIETLSDNNNVTAVASTISTPGRSSEPRRFWHGHRFLNFLLACMVFAFVISWLFHFNVPSS* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1442 232 SMART ringv_2 106 159 IPR011016 GO:0008270
Dod07g1442 232 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 95 169 IPR013083 -
Dod07g1442 232 Pfam RING-variant domain 107 158 IPR011016 GO:0008270
Dod07g1442 232 MobiDBLite consensus disorder prediction 1 21 - -
Dod07g1442 232 SUPERFAMILY RING/U-box 104 162 - -
Dod07g1442 232 CDD RING_CH-C4HC3_MARCH 107 159 - -
Dod07g1442 232 PANTHER ZINC FINGER, RING-CH-TYPE 5 231 - -
Dod07g1442 232 ProSiteProfiles Zinc finger RING-CH-type profile. 99 165 IPR011016 GO:0008270
Dod07g1442 232 PANTHER OS01G0850200 PROTEIN 5 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1442 Dod-Chr7 39061556 39065143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1442 68 232 C3H Transcription Factor Family AT5G05830 62.048 3.58e-68 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1442 - - gmx:100808666 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1442 07 39061556 39065143 Dod08g0737 08 8822727 8826369 ECH
Dod07g1442 07 39061556 39065143 Dod07g1442 07 39061556 39065143 ECH