Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1441 ATGGGGGCTCGTTGCTCTAAATTCTCCCTTTGCTGGTTCCACTCCCACCTCAAACCATGTGTCCTTGAATCCTCCGACCAAGAAGATGGTGGCAAGAGTGAAAAGAACTTGTGGCCAGCCTTTGGTGAGTTCAGCTTGGAGCAACTGAAGGCTGCCACAGACGGGTTCTCCTCAGAAAACATAGTGTCTGAGCATGGTGAGAAGGCTCCCAATGTTGTCTACAAAGGGAAACTTGAGAATGGACAGTGGATTGCCATCAAACGCTTCAACAAGTTCGCTTGGCCTGATTCTCGCCAATTCCTTGAGGAAGCCAGACAAGTGGGGAGCCTTAGAAGTGAACGTTTGGCCAATTTGATTGGTTGTTGCTATGAAGGGGAAGAGAGGCTGCTAGTGGCAGAGTTTATGCCACATGAAACATTGGCTAGGCATCTCTTTCATTGGGAGACACAGCCAATGGAATGGGCAATGAGGTTGAGGGTGGCATTCTACTTGGCTCAAGCTCTAGATTATTGCACCAGTAAAGGAAGGGGTTTGTATCATGATCTCAATGCCTATAGGATCTTGTTTGATCAGGATGGTAATCCTAGGTTGTCTTGCTTTGGACTCATGAAGAACAGTAGAGATGGAAAGAGTTACAGTACAAACTTGGCTTTCACACCTCCTGAGTACTTAAGGACTGGTAGAGTGACAGCAGAGAGTGTGGTTTACAGTTTTGGAACCCTGTTGCTAGATCTCTTGAGTGGTAAACATATTCCCCCAAGCCATGCGCTTGACCTTATTCGGGGCAAAAACTTTTTGATGTTGATGGATTCTGCGCTAGAGGGCCACTTTTCTAAGGATGATGGAACCGAGTTGGTTCGATTGGCCTCGCGTTGTTTACAGTATGAAGCTCGTGAGAGGCCAAATGCAAAGTCTCTTGTTGCTTCTCTCATGTCACTTCAGAAAGGAACAGAGGTCCCCTCATATGTTCTGATGGGTCTCAAGCATGAAACTGCATCTTCAACAAAGCAATTGTCATTGACACCTTTCGGTGAAGCTTGTTTGAGACTGGACCTTACTGCTATACATGGAATATTAGAGAAGATTGGTTACAAGGATGACGAAGGGATTGCCAATGAGCTTTCCTTTCAATTGTGGACCAGTCAAATGCAAGAGACCTTGAATTTGAAGAAGCATGGAGACACTGCTTTTCGAGCTAAGGACCTTGTCACTGCCATTGACTGCTACACCCAATTCATAGATGGAGGGACCATGGTATCACCAACAGTATATGCAAGGCGGTGCTTATCTTACTTGATGAATGACATGGCCCAAGAAGCTCTAGGGGATGCAATGCAAGCCCAAGCGGTATCTCCCGAGTGGCCCACTGCTTTGTATCTTCAAGCAGCTTGTCTTTTCAGCCTCGGAATGGAAAATGATGCACAAGAAACTCTCAAGGATGGGACTAACATGGAAGCCAAGAAAAACAAAATTTGA 1476 0.46 MGARCSKFSLCWFHSHLKPCVLESSDQEDGGKSEKNLWPAFGEFSLEQLKAATDGFSSENIVSEHGEKAPNVVYKGKLENGQWIAIKRFNKFAWPDSRQFLEEARQVGSLRSERLANLIGCCYEGEERLLVAEFMPHETLARHLFHWETQPMEWAMRLRVAFYLAQALDYCTSKGRGLYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTAESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSKDDGTELVRLASRCLQYEARERPNAKSLVASLMSLQKGTEVPSYVLMGLKHETASSTKQLSLTPFGEACLRLDLTAIHGILEKIGYKDDEGIANELSFQLWTSQMQETLNLKKHGDTAFRAKDLVTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMAQEALGDAMQAQAVSPEWPTALYLQAACLFSLGMENDAQETLKDGTNMEAKKNKI* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1441 491 SUPERFAMILY TPR-like 387 480 IPR011990 GO:0005515
Dod07g1441 491 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 489 IPR045845 GO:0004672|GO:0009742
Dod07g1441 491 Gene3D Phosphorylase Kinase; domain 1 31 134 - -
Dod07g1441 491 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 1 489 - -
Dod07g1441 491 Pfam Protein tyrosine and serine/threonine kinase 72 310 IPR001245 GO:0004672|GO:0006468
Dod07g1441 491 Gene3D Transferase(Phosphotransferase) domain 1 136 327 - -
Dod07g1441 491 ProSiteProfiles Protein kinase domain profile. 59 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1441 491 SUPERFAMILY Protein kinase-like (PK-like) 36 319 IPR011009 -
Dod07g1441 491 Gene3D Tetratricopeptide repeat domain 383 491 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1441 Dod-Chr7 39042301 39047622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1441 44 322 Glycoside Hydrolase AT3G07070 33.762 8.27e-40 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Dod07g1441 PK_Tyr_Ser-Thr 1.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1441 - - gmx:100814477 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1441 07 39042301 39047622 Dod07g1441 07 39042301 39047622 ECH