LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod07g1433	ATGCCTCAAGGCCAAGACATGTCCATGTCTAATGGCACAAATAATATGATGATGAAGATGAGTATGAGCTTCTACTGGGGCAAAGATGCAGTAGTGCTTTTTTCAGGGTGGCCTAACCGTAGTGTTGGCATGTACATCTTAGCCATCTTGTTTGTGTTCATCCTTGCAATGGTTGCTGAGGTTATGTCTAGCCAGCACATGATCATCAAGCATGGGAATGGCCCCCTCATGGGAGGGTTGACTCAAGCTACCTTCTTGTACCTCATTCGAATCAGTTTCCATTACCTGGTGATGCTTGCTGTTATGTCCTTCAATGTGGGGATCTTCATAGCTGCTGTTGCTGGCCATACCTTGGGATTCTTTATCACCAAGTCCCGTGCTCTCGCCATTGCCAATGACAGAGAACAGCACGGATCCTCTGTTATTCATAAGAGTAATGTTATTTGTACTAACAGAGACATATTTGAAAATGTACTCTAA	480	0.4417	MPQGQDMSMSNGTNNMMMKMSMSFYWGKDAVVLFSGWPNRSVGMYILAILFVFILAMVAEVMSSQHMIIKHGNGPLMGGLTQATFLYLIRISFHYLVMLAVMSFNVGIFIAAVAGHTLGFFITKSRALAIANDREQHGSSVIHKSNVICTNRDIFENVL*	160

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod07g1433	159	PANTHER	CTR FAMILY COPPER TRANSPORTER	2	137	-	-
	Dod07g1433	159	PANTHER	SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS	2	137	IPR007274	GO:0005375\|GO:0016021\|GO:0035434
	Dod07g1433	159	Pfam	Ctr copper transporter family	22	63	IPR007274	GO:0005375\|GO:0016021\|GO:0035434
	Dod07g1433	159	Pfam	Ctr copper transporter family	83	122	IPR007274	GO:0005375\|GO:0016021\|GO:0035434

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod07g1433	Dod-Chr7	38906871	38907447	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod07g1433	24	149	Inorganic Solute Cotransporters	AT3G46900	40.476	1.64e-29	103

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod07g1433	K14686		-	gmx:100808693	170.629

Showing 1 to 1 of 1 entries