Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod07g1432 | ATGGCTGCGAATGAAGATGCAGAACAGGAATTTCCACCACAGAAGAAGAAGCCACCTTCTGAGGATGAGAAGAGGAAGAAGAAAATTGTGCCTGGGAGTTTGATGAAAGCTGTCGTGAGACCTGGTGGGGGTGATTCTGGACCTTCGGATGGTGATCAGGTTATCTATCATTGCACTGTTCGAACTTTGGATGGAGTGGTTGTGGAATCTACGAGGTTTGATTATGGAGGCAAGGGCACACCAATAAGACAAGTTTTGGGCAAGAGCAAGTTGTTATTGGGCTTGCTGGAAGGACTTTCAACAATGTTGAAGGGTGAAGTGGCAATGTTCAAGATGAAGCCCCTGATGCACTATGGTGAGGATGATTGTCCTATTTCTGCTCCTGATGGTTTTCCAAAGGATGATGAACTTCATTTTGAAATTGAGCTGATAGATTTTTTCAAAGCCAAGGTTGTTACTGATGATTTGGGAGTTGTTAAAAAGGTTATTCGGGAAGGACAGGGTTGGGAGTCTCCAAGAGAACCTTACGAAGTGAAGGCTTGGATTTCAGCGAAGACAGTTGATGGGAAATTGATTATTTCACATACAGAAGGAGAACCATATTTTTTTACGTTTGGAAAATCGGAGGTACCTAAAGGCCTTGAGATGGGGATAGGTACAATGACTCGGGAAGAGAAGGCTGTCATATATGTTACTAGTCAGTATTTAACTCAGTCTCCACTGATGCCTGTATTAGAAGATTATGATGAAGTCCAATTTGAAGTGGAGCTTGTCCACTTTATTCAAGTGAGGGACATGCTTGGAGATGGGCGCCTAATAAAACGCCGGATTCGTGATGGAAAAGGTGAGTTTCCAATGGATTGCCCTCTTCACGACAGTTTACTTCGTATTCATTACAAGGGCATGGTTCTCAATGAAGAAAAGAGGGTATTCTATGATACAAGAGTTGATAATGATGGTCAGCCTTTGGAGTTCTGTTCTGGAGAAGGGTTGGTGCCAGAAGGATTTGAAATGTGTGTTCGTCTGATGCTTCGAGAAGAGATAGCTCTTGTCTCATGTCCCCCTGACTATGCATATGATAAGTTCCCAAGGCCAGCAAATGTTCCTGAGGGTGCTCATATTCAATGGGAGATTGAACTTCTTGGTTTTGAAATGCCAAAGGACTGGACTGGCTTGGACTTTAATAGTATAATGAATGAGGCTGAGAAGATCAGAAACACGGGTAACAGGCTGTTCAAAGAAGGGAAATACGAACTTGCCAAGGCAAAGTATGAAAAGGTGCTTCGAGAGTTTAATCATGTTAATCCACAAGATGATGAGGAAGGAAAAGTATTCGTAGATACACGGAATTTACTCCACCTGAATGTTGCTGCATGCCTTCTGAAATTGGGAGAATGCAGAAAGTCCATTGAGACTTGCAATAAGGTTTTGGAAGCAAACCCTGCACATCTTAAGGGTCTGTATCGTCGCGGAATGGCCTACATGGCTGCTGGAGATTTTGAAGAAGCAAGGAGCGATTTCACAATGATGATGAAAGTTGACAAGTCAACTGAATCAGATGCAAATGCAGCTCTTTCAAAACTGAGGCAGAAGGAGCAGGAAGTTGAGAGGAAGGCTCGGAAACAATTTAAAGGGCTTTTCGACAAGAAGCCTGGAGAAATTGCAGAAATCAAAGCTGATGAGGATGGAAATCAGAGTACAAGTGAAAGCCAGAAGGACAGTGAAGTACACGAGGATGCCGATGGAACAAACTCAGAGGATTCGCATGAAGATGTACCCGATGCGCGTCAGAGGAGTTGGTTCTCTCTCTTTTGGCCATCTGGCAGAAGAGTGTTTACTTCTCTTGGCCTCCAAAGATGCACCATACTATGA | 1872 | 0.4348 | MAANEDAEQEFPPQKKKPPSEDEKRKKKIVPGSLMKAVVRPGGGDSGPSDGDQVIYHCTVRTLDGVVVESTRFDYGGKGTPIRQVLGKSKLLLGLLEGLSTMLKGEVAMFKMKPLMHYGEDDCPISAPDGFPKDDELHFEIELIDFFKAKVVTDDLGVVKKVIREGQGWESPREPYEVKAWISAKTVDGKLIISHTEGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVTSQYLTQSPLMPVLEDYDEVQFEVELVHFIQVRDMLGDGRLIKRRIRDGKGEFPMDCPLHDSLLRIHYKGMVLNEEKRVFYDTRVDNDGQPLEFCSGEGLVPEGFEMCVRLMLREEIALVSCPPDYAYDKFPRPANVPEGAHIQWEIELLGFEMPKDWTGLDFNSIMNEAEKIRNTGNRLFKEGKYELAKAKYEKVLREFNHVNPQDDEEGKVFVDTRNLLHLNVAACLLKLGECRKSIETCNKVLEANPAHLKGLYRRGMAYMAAGDFEEARSDFTMMMKVDKSTESDANAALSKLRQKEQEVERKARKQFKGLFDKKPGEIAEIKADEDGNQSTSESQKDSEVHEDADGTNSEDSHEDVPDARQRSWFSLFWPSGRRVFTSLGLQRCTIL* | 624 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod07g1432 | 623 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 51 | 147 | IPR001179 | GO:0003755 | |
| Dod07g1432 | 623 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 292 | 384 | IPR001179 | GO:0003755 | |
| Dod07g1432 | 623 | Pfam | Tetratricopeptide repeat | 485 | 507 | IPR019734 | GO:0005515 | |
| Dod07g1432 | 623 | Gene3D | Tetratricopeptide repeat domain | 395 | 549 | IPR011990 | GO:0005515 | |
| Dod07g1432 | 623 | Gene3D | - | 1 | 148 | IPR046357 | GO:0003755 | |
| Dod07g1432 | 623 | Coils | Coil | 518 | 541 | - | - | |
| Dod07g1432 | 623 | Gene3D | - | 149 | 262 | IPR046357 | GO:0003755 | |
| Dod07g1432 | 623 | SMART | tpr_5 | 450 | 483 | IPR019734 | GO:0005515 | |
| Dod07g1432 | 623 | SMART | tpr_5 | 484 | 517 | IPR019734 | GO:0005515 | |
| Dod07g1432 | 623 | SMART | tpr_5 | 401 | 434 | IPR019734 | GO:0005515 | |
| Dod07g1432 | 623 | SUPERFAMILY | FKBP-like | 261 | 384 | - | - | |
| Dod07g1432 | 623 | SUPERFAMILY | TPR-like | 399 | 538 | IPR011990 | GO:0005515 | |
| Dod07g1432 | 623 | MobiDBLite | consensus disorder prediction | 554 | 595 | - | - | |
| Dod07g1432 | 623 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 48 | 144 | IPR001179 | GO:0003755 | |
| Dod07g1432 | 623 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 174 | 257 | IPR001179 | GO:0003755 | |
| Dod07g1432 | 623 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 293 | 381 | IPR001179 | GO:0003755 | |
| Dod07g1432 | 623 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE PASTICCINO1 | 70 | 572 | IPR031135 | GO:0030154|GO:0042761|GO:0099402 | |
| Dod07g1432 | 623 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
| Dod07g1432 | 623 | ProSiteProfiles | TPR repeat profile. | 484 | 517 | IPR019734 | GO:0005515 | |
| Dod07g1432 | 623 | MobiDBLite | consensus disorder prediction | 9 | 30 | - | - | |
| Dod07g1432 | 623 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 175 | 261 | IPR001179 | GO:0003755 | |
| Dod07g1432 | 623 | SUPERFAMILY | FKBP-like | 150 | 260 | - | - | |
| Dod07g1432 | 623 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 70 | 572 | - | - | |
| Dod07g1432 | 623 | Gene3D | - | 263 | 390 | IPR046357 | GO:0003755 | |
| Dod07g1432 | 623 | SUPERFAMILY | FKBP-like | 25 | 150 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dod07g1432 | 48 | 549 | Calmodulin-binding Proteins | AT5G48570 | 29.883 | 2.77e-61 | 212 |