Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1417 ATGGCTGAGGAGGGTTTTGAGCCATACCATGTCCCACAACAAAGCAGAAGAGATAAGCTAAGAGTTGTTGTGGCTCAGAACCAACCAACCCTCGTTGAACCTTCCTCCAATACTTCACTACCTCCTGGTTGTGCTTCTTCTTTGCTCCCTTTGTACGACCCATCACTCATTTCCTCCGATTTGCTAACTTGTGCAACCCAACAACACCAACACCAACAACAAGGTACTCATCACGGTTTTCACCACCACCACCACCACAGCAACAACGAAGCTTCAAAACCCAACTTGGGTTGTGCTGTAAAAGAAGAACGTTCTAGTTTGATGATGGGGTTTGGTGTAGGAGTAGGAATAGGAGGAGGGGGAGGAGTCGTGAATGGATCTTCTTCTCCTCCTCCTTCTAACTCATCTTCGGTGTCTCATCACCATCAGCATGCTTACTTGGATCCAGAATCTTCTTCTTTGCCTCTGAACCCGGGTTCAATTCAGGTTTTTGGGAACAACCCTTTTCTCTACCAGGCACAAAACCTTAGGGAGTTCGATCATGGCTACAGTGGTGGCGGTGAGATCATGGTGTTCAAGCCTGAGCCATTGTCTTTGTCTCTCTCATCACATCACAACAGTAACCACCACCACCACCACCATGGTGACAATAATCTCCCACTGGAGCTGAATCTTCAGCGATATGGGCCAGTGATTAGTGGTGTTGGTGTTGGTGGTTGTGTGATTCCGGGGCTGGTCGGAGGAGGAGGAGGAGGAAGTACTAGTGCTTCTGCCTCCAACGAAGTTGCTAGAAGCTCGGTTCCACTGGGTCCATTTACTGGCTATGCTTCTATATTGAAGGGATCGAGGTTCTTGAAGCCAGCACAGCAGTTATTGGAGGAGCTATGTGATGTTGGTGGTGCTGGTGGAGTTTGTGCCGATGACAAGATCATTGTGGCTGATGCATCGTTGATGGAGCCTCCTCCTTCTGAGTGCTTGAGTTCTGGTGCTCATCATGAAGATCCATCACTTGGGGATCATGGTGGTGACGGTCGCAAGAAGTCAAGGCTATTAACTATGCTTGATGAGGTTTACAGGAGGTACAGGCAATATTATCAACAGATGCATGCTGTGGTAACATCATTCGAGTATGTTTCTGGCCTCAGTAATGCAGCTCCCTATGCAAGTTTGGCTATAAAAACTATGTCGAAACATTTTAGATGCTTGAAGAATGCAATTAGTGACCAACTCCAGTTCACCAGTAAGGCTCATTTTCACCTAAGCAACATGAAGGACGAGTCTCCAAGATTTGGTAACAACGATAGAGGCCCTTACGGCCAAAGGTTTATTGAGCACCAACCTGTTTGGCGGCCTCAAAGAGGACTCCCTGAGCGTGCCGTGACCGTTCTGAGGGCATGGCTGTTTGAGCATTTTCTTCACCCCTATCCTACTGATACTGACAAGCTGATGTTGGCTAAACAAACTGGTCTATCTCGGAGCCAGGTGTCTAATTGGTTTATTAATGCAAGAGTAAGGCTCTGGAAACCTATGGTGGAAGAAATACACATGCTGGAAACTCGGCAAGGTCAAAAAAGTTCGCATCGAGAAGAGCATAGTAGGAACAAATCAAGTGATCAGTTACCTTCAGATAATTCTCTTGTTACTGAGAATCCATCTACCTCCACTGATAAATTTCAGGATGGCCCTTACAAGCGTGCTATAAATGAACTTCCTCATATACCGGTTAGGAGTCAGGAACAAGTGAATCTTTCCTGTACAGGCAATCTGCCAGTAGGTGTTGCAGTGAGCATGGGCAGTGCAAGCAACAGTGTATCACTGACACTAGGCCTTCATCAAAATCATGGGATCAGTTTGGCCGAACCCTTTCCCTTGAGCGCGGCTCAGCGTTTCGGTCTCGGCCTCGAAACCAACAATGAAGGATATGTCATGAGTGGTTTTGAATCACAAAATCGGCATTTTGGAAGAGATGTTATTGGAGGTCAACTGTTGCATGACTTTGTAGGCTGA 2007 0.4684 MAEEGFEPYHVPQQSRRDKLRVVVAQNQPTLVEPSSNTSLPPGCASSLLPLYDPSLISSDLLTCATQQHQHQQQGTHHGFHHHHHHSNNEASKPNLGCAVKEERSSLMMGFGVGVGIGGGGGVVNGSSSPPPSNSSSVSHHHQHAYLDPESSSLPLNPGSIQVFGNNPFLYQAQNLREFDHGYSGGGEIMVFKPEPLSLSLSSHHNSNHHHHHHGDNNLPLELNLQRYGPVISGVGVGGCVIPGLVGGGGGGSTSASASNEVARSSVPLGPFTGYASILKGSRFLKPAQQLLEELCDVGGAGGVCADDKIIVADASLMEPPPSECLSSGAHHEDPSLGDHGGDGRKKSRLLTMLDEVYRRYRQYYQQMHAVVTSFEYVSGLSNAAPYASLAIKTMSKHFRCLKNAISDQLQFTSKAHFHLSNMKDESPRFGNNDRGPYGQRFIEHQPVWRPQRGLPERAVTVLRAWLFEHFLHPYPTDTDKLMLAKQTGLSRSQVSNWFINARVRLWKPMVEEIHMLETRQGQKSSHREEHSRNKSSDQLPSDNSLVTENPSTSTDKFQDGPYKRAINELPHIPVRSQEQVNLSCTGNLPVGVAVSMGSASNSVSLTLGLHQNHGISLAEPFPLSAAQRFGLGLETNNEGYVMSGFESQNRHFGRDVIGGQLLHDFVG* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1417 668 Gene3D - 452 514 - -
Dod07g1417 668 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 90 642 - -
Dod07g1417 668 MobiDBLite consensus disorder prediction 538 559 - -
Dod07g1417 668 Pfam Associated with HOX 278 407 IPR006563 -
Dod07g1417 668 MobiDBLite consensus disorder prediction 122 152 - -
Dod07g1417 668 CDD homeodomain 449 510 IPR001356 GO:0003677
Dod07g1417 668 MobiDBLite consensus disorder prediction 518 537 - -
Dod07g1417 668 SMART HOX_1 449 513 IPR001356 GO:0003677
Dod07g1417 668 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 90 642 - -
Dod07g1417 668 SMART prehox3 273 408 IPR006563 -
Dod07g1417 668 SUPERFAMILY Homeodomain-like 451 515 IPR009057 -
Dod07g1417 668 MobiDBLite consensus disorder prediction 126 142 - -
Dod07g1417 668 ProSiteProfiles 'Homeobox' domain profile. 446 509 IPR001356 GO:0003677
Dod07g1417 668 MobiDBLite consensus disorder prediction 518 563 - -
Dod07g1417 668 Pfam Homeobox KN domain 466 505 IPR008422 GO:0003677|GO:0006355
Dod07g1417 668 MobiDBLite consensus disorder prediction 321 345 - -
Dod07g1417 668 MobiDBLite consensus disorder prediction 67 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1417 Dod-Chr7 38441585 38449825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1417 180 668 Homeobox Transcription Factor Family AT5G02030 49.242 8.91e-123 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Dod07g1417 POX 4.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1417 - - ahf:112727818 808.135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1417 07 38441585 38449825 Dod07g1417 07 38441585 38449825 ECH