Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1404 ATGGAGTTTAGTCCTGGACAAGGTAGATCTTACACTTGTACTTTTTGCAAGAGAGGGTTCTCAAATGCACAGGCACTTGGAGGTCACATGAATATCCATAGAAGAGACAGAGCCAGGCTTAGGCAATCTTTTGAAGAAAACTTGTTGTCTATGGACAGCTCAGTGAAGAACACCACTGATGATCAGGAGCCTCAGCCTTTGGAGGAGAAAGCTTTGTTTGGAGTGGAGTATTCTGGTGGTGACCAGCAAAAACATAGTAGCAATGATGAAAAGTACAAGGATGATCATGCACTTCAAAGGGGCAAGGCAATTGGTACTTCAGATCAACATCCTAATCAGCTTCCTCTACTAGTTGGCATGCCAAGTTCTATAAATGATGTTAGGTTGGAGGGTGTTGGAGAGAAGAAAAATGATGTGGACCTTGAGCTTCGTTTAGGGCTGAGCCGCAAGAGGGACCAACTTTGA 465 0.4409 MEFSPGQGRSYTCTFCKRGFSNAQALGGHMNIHRRDRARLRQSFEENLLSMDSSVKNTTDDQEPQPLEEKALFGVEYSGGDQQKHSSNDEKYKDDHALQRGKAIGTSDQHPNQLPLLVGMPSSINDVRLEGVGEKKNDVDLELRLGLSRKRDQL* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1404 154 SUPERFAMILY beta-beta-alpha zinc fingers 8 37 IPR036236 -
Dod07g1404 154 MobiDBLite consensus disorder prediction 83 101 - -
Dod07g1404 154 MobiDBLite consensus disorder prediction 77 113 - -
Dod07g1404 154 PANTHER OS07G0101800 PROTEIN 8 151 - -
Dod07g1404 154 ProSitePatterns Zinc finger C2H2 type domain signature. 13 33 IPR013087 -
Dod07g1404 154 ProSiteProfiles Zinc finger C2H2 type domain profile. 11 38 IPR013087 -
Dod07g1404 154 PANTHER TRANSCRIPTIONAL REGULATOR TAC1 8 151 - -
Dod07g1404 154 Gene3D Classic Zinc Finger 4 68 - -
Dod07g1404 154 SMART c2h2final6 11 33 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1404 Dod-Chr7 38097683 38098147 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1404 3 147 C2H2 Transcription Factor Family AT3G53820 38.776 2.87e-20 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod07g1404 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1404 - - ccaj:109793777 139.813