Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1403 ATGGAACAGGGTCAATGTTGGATGCAGACAACAAAGAGGAAGTTCTCTTTGAGCTCGAATCTCATCACTTCATCACCAACAACAACCCATAACCCTTCCTATGATGACTCATGGGAAGAACAAGCCTTTGCAGAAGATGCGGCTGGTTCTCTTGGTGGATGCATATGGCCACCAAGATCATATTCTTGCAGCTTCTGCAGGAGAGAGTTTAGGTCCGCACAAGCTCTAGGTGGCCACATGAATGTTCATAGGAGGGATAGAGCAAGGCTAAAGCAACCCTCTAGCCCCAAGAATGAAGAAATTCTATTCCACCATCATGACCTTGAGAATCATCACCTCCACAATCCTGTTCAAAATAATAATCCTTTCACATCTTTGGGATCATATAACCTATACCCTTCTTCTGTTTGTGGCTTGGCTTATAATAAAACTACTAACCCTAGTTCTGATCTTGATGTTATTGCTTCAGCTTCAGCTTCATCACCATCACCTAATTCCAAGCCTTTATTAGCTCCTCCACCGGTTAATGGACCACTTTGTAATTCTTCTATTGTCCATAAGACTAATTCCTCAGTCTATTCTTCTGAATCATGGTCAAATTTAGTTGGAGATCATCATCAAAGGTTGTATTCTAAGAAGTTTTACCCTGAAGCTGATTTTGAGAAAGTCTCAAAGGGGTTGTTGGACTCTGGGTGTCGGGGTAAGGGGGATGATAATGATTCTGGAGATGCTGATATGGCTGTGAGCTTGAATTTGGTTGTTTGTAGAGCTCAAGCACCTGTGCAGTTTGAGACCAAAGAGGCAGATATCAATTGCAAGAGGAGGAAAACAGATGCTTCCTCAATTCCATTTTTACCAAAGTCAAGCTCAGTTGATCATAGACATCATGTGCAACCACAGGTGTTTGAATTAAACCCTAGCTCCATTGAAGAGCTAGATCTGGAGTTAAGGCTTGGTAACAGGTCCAAGGTATAG 975 0.4226 MEQGQCWMQTTKRKFSLSSNLITSSPTTTHNPSYDDSWEEQAFAEDAAGSLGGCIWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQPSSPKNEEILFHHHDLENHHLHNPVQNNNPFTSLGSYNLYPSSVCGLAYNKTTNPSSDLDVIASASASSPSPNSKPLLAPPPVNGPLCNSSIVHKTNSSVYSSESWSNLVGDHHQRLYSKKFYPEADFEKVSKGLLDSGCRGKGDDNDSGDADMAVSLNLVVCRAQAPVQFETKEADINCKRRKTDASSIPFLPKSSSVDHRHHVQPQVFELNPSSIEELDLELRLGNRSKV* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1403 324 ProSiteProfiles Zinc finger C2H2 type domain profile. 61 88 IPR013087 -
Dod07g1403 324 ProSitePatterns Zinc finger C2H2 type domain signature. 63 83 IPR013087 -
Dod07g1403 324 SUPERFAMILY beta-beta-alpha zinc fingers 58 87 IPR036236 -
Dod07g1403 324 Pfam C2H2-type zinc finger 61 85 - -
Dod07g1403 324 PANTHER C2H2 AND C2HC ZINC FINGER PROTEIN 1 324 - -
Dod07g1403 324 PANTHER OS07G0101800 PROTEIN 1 324 - -
Dod07g1403 324 SMART c2h2final6 61 83 IPR013087 -
Dod07g1403 324 Gene3D Classic Zinc Finger 58 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1403 Dod-Chr7 38082743 38083717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1403 35 92 C2H2 Transcription Factor Family AT2G37740 79.310 5.44e-26 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod07g1403 zf-C2H2_6 1.4e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1403 - - gmx:100801427 345.51