Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1385 ATGCAGGTTTTCTATTATTTTATTAAGTCAGAGAATAATCCTGAGAAAGACCCTCTCATGCTTTGGCTATCTGGTGGTCCTGGCTGTTCTTCATTTACAGGCCTTGCCTTTCAAATAGGTCCGATTGCATTTAAAATTGAGGATTACAACGGGAGCTTGCCTAATTTGGTCTTGAGGCCACAGTCATGGACAAAGGTGTCTAGCATTATTTTTGCAGATTTGCCTTTCGGAACTGGCTTCTCTTATGCAAAAAATGCCGCGCACTATCGGAGTGACTGGAAATTAGTTCACCATGTCCATCAATTTCTTAGAAAGTGGCTTGTTGACCATCCGGAATTTATTTCAAATAAATTTTACTTTGGAGGTGATTCTTACTCTGGCATTCCTGCCCCTGCTATTGTTCAAGAAATCTCAAACGGAAACGAAAAAGGTCTCCAACCCTGGATAAATCTTCAGGGATATCTTCTCGGAAACCCCCTAACGACAGGAAGAGAAGGAAATGAACGAATCCCATATGTTCATGGAATGGGACTTATTTCTGATGAACTTTACTTATCGCTGCAGAGAAATTGTAAAGGAGAATACATCAATGTGGATTCCAAAAATGAATTATGTTTGAGAGACATGGGCTACTATTATGAGTGCGTGTCAAGACTTGATATGCATTATATTTTGGGTCCCTATTGCGGAGAATATATCTTAAATCTAAATGATGCGAAGCGTAGGAGATCTCTGACACAAAAGCTGAAGGCCCCTCTTATAAGTTCTCATCTAACAGACATGCCAAATACAGGCTGCCAAATGGCTTATGTTTATTTCCTCGGCAATGAATGGGCCAACAATGAGAGTGTTCGCAAGGCATTGCACGTTCGACAGGGTTTTGGGGAATGGACACGATGTTACAAAACTGATTTTGAATATGAAATCTCTAGCAGCTTTGAGATTCATGTAAATCTCAGTGCTAAAGGCTACCCTTCCTTGATATACAGTGGGGATCATGACGGAGATGTTCCTTTCAGTTCAACACAAGCATGGATAAGAAGTCTAAACTACTCCATTGTACATGATTGGAGGCCATGGCTTGTAAACGGTCAAGTAGCAGGATACACGAGGACTTACTCCAATCAAATGACATTTGCAACTGTGAAGGGTGCAGGACATGTAGCTACTGTGTTCAAGCCTGATGAATGTTTAGCCATGTTCACTAGGTGGCTATCTAATATGCCTTTATAA 1233 0.4088 MQVFYYFIKSENNPEKDPLMLWLSGGPGCSSFTGLAFQIGPIAFKIEDYNGSLPNLVLRPQSWTKVSSIIFADLPFGTGFSYAKNAAHYRSDWKLVHHVHQFLRKWLVDHPEFISNKFYFGGDSYSGIPAPAIVQEISNGNEKGLQPWINLQGYLLGNPLTTGREGNERIPYVHGMGLISDELYLSLQRNCKGEYINVDSKNELCLRDMGYYYECVSRLDMHYILGPYCGEYILNLNDAKRRRSLTQKLKAPLISSHLTDMPNTGCQMAYVYFLGNEWANNESVRKALHVRQGFGEWTRCYKTDFEYEISSSFEIHVNLSAKGYPSLIYSGDHDGDVPFSSTQAWIRSLNYSIVHDWRPWLVNGQVAGYTRTYSNQMTFATVKGAGHVATVFKPDECLAMFTRWLSNMPL* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1385 410 Pfam Serine carboxypeptidase 2 407 IPR001563 GO:0004185|GO:0006508
Dod07g1385 410 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 1 409 - -
Dod07g1385 410 Gene3D alpha/beta hydrolase 1 409 IPR029058 -
Dod07g1385 410 SUPERFAMILY alpha/beta-Hydrolases 2 409 IPR029058 -
Dod07g1385 410 PRINTS Carboxypeptidase C serine protease (S10) family signature 72 82 IPR001563 GO:0004185|GO:0006508
Dod07g1385 410 PRINTS Carboxypeptidase C serine protease (S10) family signature 106 131 IPR001563 GO:0004185|GO:0006508
Dod07g1385 410 PRINTS Carboxypeptidase C serine protease (S10) family signature 59 71 IPR001563 GO:0004185|GO:0006508
Dod07g1385 410 PRINTS Carboxypeptidase C serine protease (S10) family signature 377 390 IPR001563 GO:0004185|GO:0006508
Dod07g1385 410 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 1 409 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1385 Dod-Chr7 37579476 37590284 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1385 274 410 Calmodulin-binding Proteins AT2G22960 55.396 3.44e-49 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1385 K16296 - gmx:100780069 629.402