Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1383 ATGTTGAATCGCGGGTCAATTGTTTCGGCTGAAGTGGTTGGTTCCGGTGGGGATGAGCTGTATGAGCAGCTATGGAAGGCATGTGCGGGACCACTGGTGGACGTTCCTCGTGTTGGGGAGAGGGTCTTCTACTTCCCTCAGGGGCACATGGAACAATTAGAAGCCTCTACGAATCAGGAACTGAATCAGAGGATTCCTCTGTTCAAACTTCCCCCGAAGATCCTTTGTCGGGTCGTGAACGTCCATTTACTGGCTGAACAAGAAACAGATGAGGTTTATGCACAGATTACTTTGGTGCCGGATTCCAATCAAGCTGAGCCTACAAGCCTTGATCCGTGCCCGGTCGAACCTCCGAGGCCGGCGGTTCACTCGTTCTGCAAGGTCTTAACTGCGTCGGATACCAGTACACATGGTGGATTCTCTGTTCTCAGGAAACATGCCACAGAATGCCTTCCTCCTTTGGACATGTCCCAACCAACACCAACTCAGGAATTGGTTGCCAAGGATCTTCATGGTTATGAATGGCGTTTTAAGCATATATTTAGAGGTCAGCCGCGCAGACACTTGCTCACAACTGGATGGAGTACCTTTGTGACTTCCAAGAGATTGGTTGCTGGAGATACCTTTGTGTTTTTGAGAGGGGACAATGGAGAATTACGTGTTGGAGTGAGACGTCTTGCTCGTCATCAGAGTAGCATGCCGTCGTCTGTGATTTCCAGTCAGAGCATGCACCTCGGAGTTCTTGCAACTGCCTCTCATGCTGTCGCAACTCAGACTCTTTTCGTAGTATATTATAAGCCAAGGACGAGCCAGTTCATCATCAGCCTCAACAAGTATTTGGAGGCTGTTAACAATAAGTTTAGCGTTGGCATGAGGTTCAAGATGAGGTTTGAGGGGGATGATTCTACTGAAACTGACAAAAGATTTTCAGGTACTATAGTAGGAGTGGAAGATATTTCTCCTTACTGGGAAAATTCTAAATGGCGATCACTTAAGGTTCAATGGGATGAACCAGCAGCTGTTCCAAGACCTGATAGGGTTTCGCCATGGGAGATAGAACCCTTTGTGGCTTCTGCTCCTACATCCTCAGTTCAACCTACTGTAGTAAAGGCTAAAAGGCCAAGACCAACCAGCGAACTTCCAGATCTTGACACAACATCGGCAGCCTCTGCTTTCTGGGATTCTGCACGGACACAAGCTGATATGACACAACTTAGTGTTTTGGCTGAAAGCAAAAGGAGTGATAGTACCAGTATGTGGCACCATAAGCAAATCTATATTAATAGTAAAAGCAACAGCAATACTTTATCAAGGCATCAGACAGAAGGAAGTTGGTTATCTTCTCCCCATTCTTCTTGTCCATCTCAATTATTTCAGGATCCAATAGATGATAGCAAGAGTGTCTCAGCTTGGCCTGTGTCAAAGCCTTATTCATCCAGATTGAACAATGATCATGTGCCTGACCAGGCTGAGAAGGAAAAAACGGCCGAGACTGCTACAAGTTGTCGATTGTTTGGTATCGATCTTATTAATCATTCTAGGAGCTCACCTGCTGTAGAAAAGGCATCTGCACATGCATTAAACGATCCCAGAGTCACTGCTGAAGGCTGCGCCAGCACCTTGTCCAGAACTGAGGCAGGCCATAAGTCTGATGTCTCACTGGCTTGTAAGGAGAGGAAACAAGACCAGCAGCAAGTATCACCAAAAGAGACTCAGAGCAAGCCAATTTGTAGCAGAAGTCGCACCAAGGTTCAAATGCAGGGAGTCGCAGTTGGTCGTGCTGTGGACTTGACCATGTTGGATGGTTATGATCAACTTCTAGATGAGTTGGAGGAGTTGTTTGACATAAAGGGGCAGCTCCAAGTCAGGGATAAGTGGGAAATTGTCTTCACTGATGATGAAGGGGATATGATGCTTGTGGGAGATGATCCATGGCCGGAATTCTGTAATATGGTGAGAAGAATTTTCATATGTTCCAGCCAGGATGTGAAGAAAATGACTACAGGAAGCAAGCTGCCCATCTCTTCAATGGAAGAAGGGACTGTAATAAGCTCAGAAACAGCTGAAACCTGA 2073 0.4645 MLNRGSIVSAEVVGSGGDELYEQLWKACAGPLVDVPRVGERVFYFPQGHMEQLEASTNQELNQRIPLFKLPPKILCRVVNVHLLAEQETDEVYAQITLVPDSNQAEPTSLDPCPVEPPRPAVHSFCKVLTASDTSTHGGFSVLRKHATECLPPLDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGDNGELRVGVRRLARHQSSMPSSVISSQSMHLGVLATASHAVATQTLFVVYYKPRTSQFIISLNKYLEAVNNKFSVGMRFKMRFEGDDSTETDKRFSGTIVGVEDISPYWENSKWRSLKVQWDEPAAVPRPDRVSPWEIEPFVASAPTSSVQPTVVKAKRPRPTSELPDLDTTSAASAFWDSARTQADMTQLSVLAESKRSDSTSMWHHKQIYINSKSNSNTLSRHQTEGSWLSSPHSSCPSQLFQDPIDDSKSVSAWPVSKPYSSRLNNDHVPDQAEKEKTAETATSCRLFGIDLINHSRSSPAVEKASAHALNDPRVTAEGCASTLSRTEAGHKSDVSLACKERKQDQQQVSPKETQSKPICSRSRTKVQMQGVAVGRAVDLTMLDGYDQLLDELEELFDIKGQLQVRDKWEIVFTDDEGDMMLVGDDPWPEFCNMVRRIFICSSQDVKKMTTGSKLPISSMEEGTVISSETAET* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1383 690 MobiDBLite consensus disorder prediction 431 497 - -
Dod07g1383 690 ProSiteProfiles PB1 domain profile. 579 660 IPR000270 GO:0005515
Dod07g1383 690 CDD B3_DNA 123 225 IPR003340 GO:0003677
Dod07g1383 690 SMART B3_2 125 227 IPR003340 GO:0003677
Dod07g1383 690 MobiDBLite consensus disorder prediction 431 463 - -
Dod07g1383 690 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 15 679 IPR044835 GO:0003677|GO:0006355|GO:0009725
Dod07g1383 690 Gene3D - 122 226 IPR015300 -
Dod07g1383 690 PANTHER AUXIN RESPONSE FACTOR 15 679 - -
Dod07g1383 690 Pfam AUX/IAA family 557 664 IPR033389 -
Dod07g1383 690 ProSiteProfiles B3 DNA-binding domain profile. 125 227 IPR003340 GO:0003677
Dod07g1383 690 Pfam Auxin response factor 251 332 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Dod07g1383 690 Pfam B3 DNA binding domain 125 225 IPR003340 GO:0003677
Dod07g1383 690 Gene3D - 576 667 - -
Dod07g1383 690 SUPERFAMILY CAD & PB1 domains 580 655 - -
Dod07g1383 690 SUPERFAMILY DNA-binding pseudobarrel domain 111 254 IPR015300 -
Dod07g1383 690 MobiDBLite consensus disorder prediction 558 579 - -
Dod07g1383 690 Gene3D - 286 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1383 Dod-Chr7 37531872 37537052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1383 12 672 B3 DNA Binding Superfamily AT4G23980 59.552 0.0 737
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Dod07g1383 B3 7.5e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1383 K14486 - gmx:100803911 1130.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1287 01 27016917 27022085 Dod07g1383 07 37531872 37537052 PCT