Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1364 ATGGCTGGAATGGGGCTTCTTTGGATTGCATCATTGGCCTCTCTTTTCGTTGCAACCAGTGCCAGAATCCCTGGAGTTTATGCCGGAGGCCAGTGGCAGAGCGCACATGCCACTTTCTACGGTGGAAGTGATGCCTCTGGAACAATGGGCGGTGCCTGTGGGTACGGGAACCTGTACAGCCAAGGCTACGGCGTGAACACGGCGGCGCTGAGCACAGCGCTTTTCAACAACGGCCTGAGCTGCGGTTCTTGCTTCGAGATCAAGTGCGACCAGGATCCGAGGTGGTGCAACCCTGGCAGCCCTTCCATCGTTGTAACCGCCACCAACTTCTGCCCCCCGAACTTCGCTCTCCCAAGCGACAATGGCGGGTGGTGCAACCCGCCGCGGCAACACTTCGACCTCGCCATGCCCATGTTCCTCAAGATCGCGCAGTACCGCGCTGGAATCGTCCCTGTTAGTTACCGAAGGGTCGCATGCAGGAAGATAGGTGGGATCAGATTCACGATCAACGGCTTCCGTTACTTCAACTTGGTTCTGATCACCAACGTCGCGGGTGCAGGGGATATCGTGCTTGTGAGCGTGAAAGGATCCAACACAGCCTGGACCACCATGAGCCGCAACTGGGGGCAAAATTGGCAATCCAATGCTGATTTAGTGGGCCAGGCTCTCTCCTTTAGAGTCACAGGCAGTGACAGACGCACCTCAACCTCATGGAACGTGGCACCATCTAATTGGCAGTTTGGCCAGACCTTCATGGGCAAGAATTTCCGTGTTTGA 777 0.5637 MAGMGLLWIASLASLFVATSARIPGVYAGGQWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFEIKCDQDPRWCNPGSPSIVVTATNFCPPNFALPSDNGGWCNPPRQHFDLAMPMFLKIAQYRAGIVPVSYRRVACRKIGGIRFTINGFRYFNLVLITNVAGAGDIVLVSVKGSNTAWTTMSRNWGQNWQSNADLVGQALSFRVTGSDRRTSTSWNVAPSNWQFGQTFMGKNFRV* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1364 258 PANTHER EXPANSIN-A15 4 257 IPR002963 GO:0009664
Dod07g1364 258 PRINTS Expansin signature 163 175 IPR002963 GO:0009664
Dod07g1364 258 PRINTS Expansin signature 103 113 IPR002963 GO:0009664
Dod07g1364 258 PRINTS Expansin signature 210 231 IPR002963 GO:0009664
Dod07g1364 258 PRINTS Expansin signature 62 76 IPR002963 GO:0009664
Dod07g1364 258 PRINTS Expansin signature 139 152 IPR002963 GO:0009664
Dod07g1364 258 PRINTS Expansin signature 89 100 IPR002963 GO:0009664
Dod07g1364 258 PRINTS Expansin signature 175 196 IPR002963 GO:0009664
Dod07g1364 258 PRINTS Expansin signature 239 255 IPR002963 GO:0009664
Dod07g1364 258 PRINTS Expansin signature 122 139 IPR002963 GO:0009664
Dod07g1364 258 Pfam Lytic transglycolase 67 154 IPR009009 -
Dod07g1364 258 Gene3D - 18 160 IPR036908 -
Dod07g1364 258 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 50 164 IPR007112 -
Dod07g1364 258 SUPERFAMILY PHL pollen allergen 163 252 IPR036749 -
Dod07g1364 258 PANTHER EXPANSIN 4 257 - -
Dod07g1364 258 Gene3D - 164 256 IPR036749 -
Dod07g1364 258 SUPERFAMILY Barwin-like endoglucanases 31 182 IPR036908 -
Dod07g1364 258 SMART dpbb_1 67 154 IPR007112 -
Dod07g1364 258 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 174 253 IPR007117 -
Dod07g1364 258 Pfam Expansin C-terminal domain 165 242 IPR007117 -
Dod07g1364 258 PRINTS Expansin/Lol pI family signature 71 89 IPR007118 GO:0005576
Dod07g1364 258 PRINTS Expansin/Lol pI family signature 201 215 IPR007118 GO:0005576
Dod07g1364 258 PRINTS Expansin/Lol pI family signature 239 253 IPR007118 GO:0005576
Dod07g1364 258 PRINTS Expansin/Lol pI family signature 147 163 IPR007118 GO:0005576
Dod07g1364 258 PRINTS Expansin/Lol pI family signature 31 46 IPR007118 GO:0005576
Dod07g1364 258 PRINTS Expansin/Lol pI family signature 49 67 IPR007118 GO:0005576
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1364 Dod-Chr7 37114878 37118522 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1364 15 258 Expansin Gene Family AT2G39700 84.836 3.43e-158 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1364 - - gmx:100820154 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1364 07 37114878 37118522 Dod08g0796 08 9511813 9515631 ECH
Dod07g1364 07 37114878 37118522 Dod07g1364 07 37114878 37118522 ECH
Dod07g1364 07 37114878 37118522 Dod10g1728 10 38417079 38420074 ECH
Dod07g1364 07 37114878 37118522 Dod03g2936 03 61600627 61603810 ECH