Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1360 ATGAAGGAGAGGCAGCGTTGGAAAGCCGAAGAGGATGCATTGTTATGTTCTTATGTTAGAGAGTATGGTCCCAGGGAATGGAACCTTGTGTCTCAGCGCATGAACACACCTCTCAACAGGGATGCAAAGTCATGCTTAGAGAGGTGGAAGAACTACCTTAAGCCTGGCATTAAGAAAGGATCTCTTACCGAAGAAGAGCAGCGTCTCGTCATCCGCCTCCAAGCTAAACACGGCAACAAATGGAAGAAGATCGCTGCAGAAGTCCCCGGTCGGACTGCTAAGCGATTAGGCAAGTGGTGGGAAGTATTCAAAGAGAAGCAGCTCAGAGAAAAACAGGAGATCAACAAAACAATCAGTCCCATTGACGACAGCAAGTACGATCATATACTTGAAACTTTTGCAGAGAAACTAGTGAAAGAGCATCCTTCACCATCATATCTTATGGCTGCTTCAAATGGACCTTTTCTTCACACTGATGCGCCAGCCCCTGCATCAACTTTGCTTCCTTCTTGGCTCTCAAATTCTAATAACAATCAATCTGTTAGGCCACCGTCCCCTTCCGTAACACTAAGTCTCTCCCCCTCAACGGTGACGCCACCTCCTCCATGGTTGCAACCCGAAAGGGCACCAGAGAATGCTCCTCTTGTTTTGGGGAACGTAACTCCTCATGGATCTGTTCCGGCTTTCGGCGATAAATTGCTCGTGCCCCCCGAGTTAGTGGAGTGCTGTAAAGAGCTGGAAGAAGGGCATCGCGCTTGGGCGGCGCATAAGAAGGAGGCGGCCTGGAGGTTAAGAAGGGTGGAGCTGCAGTTGGAATCAGAGAAGGCGAGTCGAAGGAGGGAGAAGATGGAAGAAACGGAAGCGAAGATCAAAGCTCTGAGGGAAGAACAGAATGCTGCATTGGAGAGAATCGAGGCCGAGTACCGGGAACAGCTAGCTGGACTGAGGAGAGATGCAGAAACCAAAGAGCAGAAGTTGGCTGAGCAATGGAGTTCGAAGCACTTGCGCCTTGTGAAGTTTCTAGACCAGGTAGGCTGCAGACCCCGGATTGAGCCAAATGGAAGATAA 1068 0.4981 MKERQRWKAEEDALLCSYVREYGPREWNLVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLREKQEINKTISPIDDSKYDHILETFAEKLVKEHPSPSYLMAASNGPFLHTDAPAPASTLLPSWLSNSNNNQSVRPPSPSVTLSLSPSTVTPPPPWLQPERAPENAPLVLGNVTPHGSVPAFGDKLLVPPELVECCKELEEGHRAWAAHKKEAAWRLRRVELQLESEKASRRREKMEETEAKIKALREEQNAALERIEAEYREQLAGLRRDAETKEQKLAEQWSSKHLRLVKFLDQVGCRPRIEPNGR* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1360 355 Pfam Myb-like DNA-binding domain 7 67 - -
Dod07g1360 355 Gene3D - 62 121 - -
Dod07g1360 355 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 1 354 - -
Dod07g1360 355 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 108 IPR017930 -
Dod07g1360 355 Coils Coil 264 325 - -
Dod07g1360 355 PANTHER TRANSCRIPTION FACTOR AS1 1 354 IPR031055 GO:0005634|GO:0006351|GO:0010338
Dod07g1360 355 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Dod07g1360 355 CDD SANT 6 53 IPR001005 -
Dod07g1360 355 SUPERFAMILY Homeodomain-like 4 98 IPR009057 -
Dod07g1360 355 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Dod07g1360 355 MobiDBLite consensus disorder prediction 175 194 - -
Dod07g1360 355 CDD SANT 63 104 IPR001005 -
Dod07g1360 355 MobiDBLite consensus disorder prediction 175 209 - -
Dod07g1360 355 Gene3D - 4 58 - -
Dod07g1360 355 SMART sant 3 55 IPR001005 -
Dod07g1360 355 SMART sant 58 106 IPR001005 -
Dod07g1360 355 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 53 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1360 Dod-Chr7 37060919 37064412 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1360 1 347 MYB Transcription Factor Family AT2G37630 68.937 7.11e-164 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod07g1360 Myb_DNA-bind_6 8.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1360 K09422 - zju:107430642 553.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1360 07 37060919 37064412 Dod07g1360 07 37060919 37064412 ECH