Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1358 ATGGCTGAGGAGAAATCAGAGGAGTATTGTTTGGAGAATAAGCAATCAACAGCTGCTTCTAGCTCCACTGTGTCTGAAGGCAGTGGCAGTGCTACACACAGGTCCCCCGGGATAAGTAGCCGGGCATCGGCTTCGCCTTCTCACCGTAGGACTACTGGTCCTATAAGGCGAGCAAAGGGCGGTTGGACAGCACAGGAGGATGAGACATTAAGGAATGCTGTTGCAGCTTTCGAGGGAAAAAAATGGAAGAAAATAGCTGAGTTTTTCCCAGATAGATCAGAAGTTCAATGTCTGCACAGATGGCAAAAGGTTCTAAATCCAGAACTTGTTAAAGGACCATGGACTCAGGAGGAGGATGATAAAATAGTTGAAATGGTGTCAGTATATGGACCTTCAAAATGGTCTATGATAGCCAAATCTTTACCCGGTCGAATAGGAAAACAGTGCCGAGAACGGTGGCACAATCATCTTAATCCTGACATAAAGAAGGATGCCTGGACTTTGGATGAGGAATTGGCCCTCATGAATGCTCATCTTATACATGGGAACAAATGGGCTGAAATAGCTAGGGTTCTTCAAGGAAGGACTGACAATGCTATAAAGAACCATTGGAATAGTTCTTTGAAGAAAAAGTTGGATTTCTATTTAGCTACAGGAAGACTTCCACCTATTTCGAAGAGTCCACAAGTTGCTCTCAAAGATACTGTTGCACATTCCAAAAATGCATTACTTCGTTGTTCAAATAAAGGATTAAATATTACACTTGAATCATCATCCGAAACTACAGAAATCAGTAAGCTAGATAACAATGACAAGAATCAATTACAGTCCTCAGGAACAGTTGGAGAGGTTGGTGATTCATCCAATGTTCCTGCAAATGAATCTGCTGATACTGAATGTGTAGAATGTAAGCCTGGATCATCCCACATAGATCTCAGCTGCAGCAACTCAGAACCAGTGTTAAGAGATAATTTTGGAGTAAATAGTGTGCTAAAATTTGAAAATGCTGGACTCAATGGCAAACCAATAGTTGAGAATTGCATGAATAATGGCGAAATGAGCAGTAGCAAGTTCTTTAGAACTTCCTTTTCGCACGAAAGTCCAACCTCTGGTTCTTTGTGTTATGAGCCACCACCATCAGATTTTTCAGTCCCTTTAGATTCTGTTTATTTTAATATCTTTCACCCACAGAATGAGTGCTGCTCTTCTCCAAAGGTGTCACATATTGGTTTATTCACCCCACCTTCTGTGAAGGGTAGGCAATTATGCACTGAATCACCTGAATCAATATTGAAAATGGCAGCTAAAACTTTCCCAAATGCTCCTTCCATATTGAGGAAGAGAAGGACTGGAGTCCAAACACATGTCACTCCTAGTAAAGTTGTGAAAGCAGATATTGATTCACAGACTTCTGATGAACAAGAGAGAACCAAGGAAAATTCTGGTTCTATAGTTGGAAGGTCCTCCGAGAGTCCTGCAAGCCATGGCTTTGGGAGTGACATTACTGACAATAAGGATTTCAATGCATCTCATCCATACCGGTTTAGAACCATGCGAACAGCAGTTGTCAAGTCTATTGAGAAACAGCTTGATTTTGCTTTTGACAAAGAGAAGGCTGGCGGTAGGATGAGAAAATCAAAAACAGGATCTCTGTGA 1656 0.4155 MAEEKSEEYCLENKQSTAASSSTVSEGSGSATHRSPGISSRASASPSHRRTTGPIRRAKGGWTAQEDETLRNAVAAFEGKKWKKIAEFFPDRSEVQCLHRWQKVLNPELVKGPWTQEEDDKIVEMVSVYGPSKWSMIAKSLPGRIGKQCRERWHNHLNPDIKKDAWTLDEELALMNAHLIHGNKWAEIARVLQGRTDNAIKNHWNSSLKKKLDFYLATGRLPPISKSPQVALKDTVAHSKNALLRCSNKGLNITLESSSETTEISKLDNNDKNQLQSSGTVGEVGDSSNVPANESADTECVECKPGSSHIDLSCSNSEPVLRDNFGVNSVLKFENAGLNGKPIVENCMNNGEMSSSKFFRTSFSHESPTSGSLCYEPPPSDFSVPLDSVYFNIFHPQNECCSSPKVSHIGLFTPPSVKGRQLCTESPESILKMAAKTFPNAPSILRKRRTGVQTHVTPSKVVKADIDSQTSDEQERTKENSGSIVGRSSESPASHGFGSDITDNKDFNASHPYRFRTMRTAVVKSIEKQLDFAFDKEKAGGRMRKSKTGSL* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1358 551 Gene3D - 58 109 - -
Dod07g1358 551 Gene3D - 110 163 - -
Dod07g1358 551 MobiDBLite consensus disorder prediction 481 506 - -
Dod07g1358 551 MobiDBLite consensus disorder prediction 12 50 - -
Dod07g1358 551 Gene3D - 164 227 - -
Dod07g1358 551 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 161 IPR017930 -
Dod07g1358 551 ProSiteProfiles Myb-like domain profile. 54 105 IPR001005 -
Dod07g1358 551 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 105 IPR017930 -
Dod07g1358 551 MobiDBLite consensus disorder prediction 466 480 - -
Dod07g1358 551 Pfam Myb-like DNA-binding domain 59 105 IPR001005 -
Dod07g1358 551 SUPERFAMILY Homeodomain-like 56 112 IPR009057 -
Dod07g1358 551 MobiDBLite consensus disorder prediction 258 291 - -
Dod07g1358 551 CDD SANT 113 157 IPR001005 -
Dod07g1358 551 ProSiteProfiles Myb-like domain profile. 158 208 IPR001005 -
Dod07g1358 551 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 162 212 IPR017930 -
Dod07g1358 551 MobiDBLite consensus disorder prediction 463 508 - -
Dod07g1358 551 ProSiteProfiles Myb-like domain profile. 106 157 IPR001005 -
Dod07g1358 551 Pfam Myb-like DNA-binding domain 114 171 - -
Dod07g1358 551 MobiDBLite consensus disorder prediction 1 64 - -
Dod07g1358 551 PANTHER MYB PROTEIN-RELATED 18 479 - -
Dod07g1358 551 PANTHER MYB-RELATED PROTEIN B-LIKE 18 479 - -
Dod07g1358 551 CDD SANT 62 105 IPR001005 -
Dod07g1358 551 SMART sant 110 159 IPR001005 -
Dod07g1358 551 SMART sant 162 210 IPR001005 -
Dod07g1358 551 SMART sant 58 107 IPR001005 -
Dod07g1358 551 SUPERFAMILY Homeodomain-like 108 204 IPR009057 -
Dod07g1358 551 CDD SANT 165 208 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1358 Dod-Chr7 36860531 36866364 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1358 2 551 MYB Transcription Factor Family AT3G09370 45.730 3.99e-142 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod07g1358 Myb_DNA-bind_6 5.5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1358 K09422 - gmx:778081 770.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1358 07 36860531 36866364 Dod07g1358 07 36860531 36866364 ECH