Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1335 ATGGCTGGAGTTTTGAGGCAATTGTCAATGCCAATGCCGAGGCACTCCTTGAACAACCACAACCACCACCAAATGCCGAGGCAATCTTTCATGACCAACCATCACAAACACCACCACCTTCAACATGTTCTCTATCTTTTACTATTCACAATTCACTTTCATCTTTCTTCTGCTGCAAACAGTGAAGCTCTTGCTTTGCTTTCATGGGTGAGTACTCACCCCTCTAAAGTCCCTTCACCTCTTTCTGACTGGAACCCTTTAGACCCTACTCCATGCAACTGGTCTTGCATCAAATGCTCTTCAGATAACCATGTCATAGAGCTTGACATTCAAGAAACTGAGTTAGCCCTTCCTTTCCCTTCAAATATTTCTTCCCTTCCCTTCCTTCAAAAGCTTGTAATTTCTGGGGCTAACCTAACTGGGGTTATCTCACCTGACATTGGAAACTGCCCTTCACTTTCTGTCATTGATCTTAGCTCAAATACCCTTGTTGGAAACATTCCTTCAAGTATTGGGAAGCTAAAAAATCTCCAAGACTTGAGCTTGAACTCTAACCAGCTCACTGGTCCAGTCCCAAGGGAGATTGGTGATTGTGTGAACCTTAGGAACCTCAACATATTTGATAATAGTCTTAGTGGTGATCTTCCGATCGAGCTTGGAAAGCTTTCAAATCTGGAGGTTATAAGAGCTGGAGGAAACAAGGACATTGTGGGGAAGATTCCAGATGTGCTTGGTGATTGCAGGAATCTGACTTTATTGGGACTTGCTGACACTAAGATTTCTGGTTCAATACCTTCTTCACTTGGTAAGCTAAGCATGCTTCAGACCATATCTATTTATAGCACTATGCTCTCTGGCGAGATTCCAAGTGAGATAGGAAACTGTTCAGAGCTTGTGAACTTGTTCCTTTATGAGAATGACCTAACTGGTTCAATACCAAAAGAGCTAGGCAAGCTTCAGAAGCTGGAAAAGATGTTACTTTGGCAGAACAGTTTTTCTGGAAGCATACCTGAGGAAATTGGCAACTGCAGAAGCTTGAAGAATATAGATATATCATTAAATTCTCTATCTGGAGGCATACCTCAAAGTTTGGGGAACCTCTCAAATCTTGAAGAGCTTATGCTAAGTAACAATAACATTTCTGGTTCAATACCAGCTGTTCTTGCCAATCTCACAAATCTCATACAGTTGCAGTTGGATACAAATGAGATATCAGGTTCAATTCCACCTGAGCTTGGAAAGTTGGAAAAGCTAGAAGTCTTTTTTGCTTGGCAGAACAAGCTTGAAGGAGGCATTCCATCAACATTAGGTGGTTGTAGAAGCCTTGAGGGTTTGGACTTGTCATACAATGCACTCACTGGTAGCTTACCCCCAGGCTTGTTTCAGCTTCAAAATTTAACAAAGATTCTGCTGATTTCTAATGAGATTTCTGGTCCCATCCCCCCGGAAATCGGCAACTGCAGTTCCCTTATTCGACTTCGGCTTGTAAACAACAGAATCAGTGGAGAGATACCAAGAGAAATTGGCTTCCTCAATAACCTCAGCTTCCTTGACCTGTCTGAAAATCATCTGACTGGTTCAATGCCAGAGGACATTGGGAATTGCAAGGAACTTCAAATGCTGAATCTTAGCAATAACTCACTTTCTGGTGCTTTGCCTGGTTATATATCTTCTCTTGCAAGGCTTGAGGTCTTGGATGTGTCTATGAATAATTTTTCTGGTGAGGTTCCAATGAGTATTGGCCAACTCACTTCTCTTCTTAGAGTCATTCTTAGCCGAAATTCATTCACTGGATCTATACCCTCATCACTTGGGCAGTGCTCAGGTCTTCAACTGCTTGATCTTAGCAGCAACATGCTCTCAGGAAGCATACCAGTAGAGCTGTTTGAGATTGAAGCACTAGACATTGCTCTGAATTTGAGTCACAATGCATTATCTGGAGTAGTTCCACCTCAGGTTTCTGCTTTGAGCAAGCTTTCTATTCTTGACCTTTCACACAACATGCTTGAAGGTGACTTGATGGCATTTGCAGGGCTTGAAAATCTTGTTTCACTGAACATTTCCTACAACAAATTCACTGGTTTTCTACCAGACAGCAAGTTATTCCACCAATTATCCACAACAGATTTGGAAGGGAATCAAGGTTTGTGTCCTAATGGTCATGATTCATGTTTCATTAGCAACGCTGCAATGACAAAAATGATAAATAGTACTAGTTCTAAGAGGTCTCACAGAATCAAACTGGCCATTGGATCATTAAGTGCCTTGATTGTTGCATTGGCAATCTTTGGAACAGTTACTGTCTTTCGCACAAGGACAATAGCTCAAGATGACAAAGATTCTGAGATTGGAGGGAACTCATGGCCTTGGCAGTTCACTCCATTCCAAAAGCTGAATTTCTCTGTGGAGCAAATTTTAAAGTGCTTGGTGGAATCCAATATAATTGGAAAGGGATGTTCTGGAGTTGTTTACAGAGCAGAAATGGAAAATGGGGATGTCATTGCTGTGAAGAAGCTGTGGCCAACAACAACGGCTTCCAGATATGATTGTCAAAGAGACAAGTTGGCAGTTTATGGGGGAGTTCGCGATTCCTTCTCGGCCGAGGTTAAGACACTCGGTCTGATTCGCCACAAGAACATTGTCAGGTTCTTGGGTTGCTGTTGGAATACAAACACAAGACTGCTTATGTATGACTACATGCCAAATGGAAGTCTAGGAAATCTACTCCGTGAACGAAGCAACTGCTTGGAATGGGACATCAGATATAGGATAATACTTGGAGCAGCTCAAGGTTTGGCCTATTTACACCATGATTGTGTTCCTCCCATTGTTCATAGGGACATTAAGGCCAACAATATCCTCATAGGCCTGGAATTTGAACCATATATAGCTGATTTTGGACTTGCTAAACTTGTTGATGATGGAGATTTTGCAAGATCTTCAAGTACACTAGCCGGTTCCTATGGTTACATAGCTCCTGAGTATGGCTATATGATGAAAATAACGGAGAAAAGTGATGTGTACAGCTATGGTGTTGTTGTGTTAGAAGTACTAACAGGCAAGCAACCAATTGATCCAACAATACCAGATGGACTCCACATTGTTGACTGGGTGAGACAGAGGAGAGGGGGGATTGAAGTGATAGATGAAAGCTTGCACGCCAGGCCGGAATCCGAAATCGAGGAGATTTTGCAGACCTTGGGAGTGGCTTTCCTGTGTGTAAACCCAAGCCCTGATGACAGGCCAACCATGAAAGATGTAGCAGCAATGCTGAAAGAGATTAGGCACGAAAGAGAGGACTACATGAAAGTTGACATGCTTTTAGATGGATCTTCTGCAAATGATCAACAAGGAATTTGTAAGGAAGAGGCAATGGCAAAGGTGAAACAGTCTTGTCCAATAAGCACCAGCAACACAAATTTTTCTGCATCTGTATTGATCTCCCCATCTTCCTCCGATACTAAAGTAACTCTCAAATAG 3480 0.4224 MAGVLRQLSMPMPRHSLNNHNHHQMPRQSFMTNHHKHHHLQHVLYLLLFTIHFHLSSAANSEALALLSWVSTHPSKVPSPLSDWNPLDPTPCNWSCIKCSSDNHVIELDIQETELALPFPSNISSLPFLQKLVISGANLTGVISPDIGNCPSLSVIDLSSNTLVGNIPSSIGKLKNLQDLSLNSNQLTGPVPREIGDCVNLRNLNIFDNSLSGDLPIELGKLSNLEVIRAGGNKDIVGKIPDVLGDCRNLTLLGLADTKISGSIPSSLGKLSMLQTISIYSTMLSGEIPSEIGNCSELVNLFLYENDLTGSIPKELGKLQKLEKMLLWQNSFSGSIPEEIGNCRSLKNIDISLNSLSGGIPQSLGNLSNLEELMLSNNNISGSIPAVLANLTNLIQLQLDTNEISGSIPPELGKLEKLEVFFAWQNKLEGGIPSTLGGCRSLEGLDLSYNALTGSLPPGLFQLQNLTKILLISNEISGPIPPEIGNCSSLIRLRLVNNRISGEIPREIGFLNNLSFLDLSENHLTGSMPEDIGNCKELQMLNLSNNSLSGALPGYISSLARLEVLDVSMNNFSGEVPMSIGQLTSLLRVILSRNSFTGSIPSSLGQCSGLQLLDLSSNMLSGSIPVELFEIEALDIALNLSHNALSGVVPPQVSALSKLSILDLSHNMLEGDLMAFAGLENLVSLNISYNKFTGFLPDSKLFHQLSTTDLEGNQGLCPNGHDSCFISNAAMTKMINSTSSKRSHRIKLAIGSLSALIVALAIFGTVTVFRTRTIAQDDKDSEIGGNSWPWQFTPFQKLNFSVEQILKCLVESNIIGKGCSGVVYRAEMENGDVIAVKKLWPTTTASRYDCQRDKLAVYGGVRDSFSAEVKTLGLIRHKNIVRFLGCCWNTNTRLLMYDYMPNGSLGNLLRERSNCLEWDIRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLAKLVDDGDFARSSSTLAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGLHIVDWVRQRRGGIEVIDESLHARPESEIEEILQTLGVAFLCVNPSPDDRPTMKDVAAMLKEIRHEREDYMKVDMLLDGSSANDQQGICKEEAMAKVKQSCPISTSNTNFSASVLISPSSSDTKVTLK* 1160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1335 1159 ProSitePatterns Protein kinases ATP-binding region signature. 815 838 IPR017441 GO:0005524
Dod07g1335 1159 ProSiteProfiles Leucine-rich repeat profile. 369 392 IPR001611 GO:0005515
Dod07g1335 1159 SMART LRR_typ_2 367 390 IPR003591 -
Dod07g1335 1159 SMART LRR_typ_2 511 535 IPR003591 -
Dod07g1335 1159 SMART LRR_typ_2 174 198 IPR003591 -
Dod07g1335 1159 SMART LRR_typ_2 583 607 IPR003591 -
Dod07g1335 1159 SMART LRR_typ_2 391 415 IPR003591 -
Dod07g1335 1159 SMART LRR_typ_2 439 463 IPR003591 -
Dod07g1335 1159 SMART LRR_typ_2 319 343 IPR003591 -
Dod07g1335 1159 SMART LRR_typ_2 656 678 IPR003591 -
Dod07g1335 1159 SMART LRR_typ_2 679 704 IPR003591 -
Dod07g1335 1159 SUPERFAMILY RNI-like 235 525 - -
Dod07g1335 1159 ProSitePatterns Serine/Threonine protein kinases active-site signature. 943 955 IPR008271 GO:0004672|GO:0006468
Dod07g1335 1159 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 26 1115 - -
Dod07g1335 1159 SUPERFAMILY L domain-like 426 738 - -
Dod07g1335 1159 ProSiteProfiles Protein kinase domain profile. 809 1102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1335 1159 Pfam Leucine rich repeat 638 692 IPR001611 GO:0005515
Dod07g1335 1159 Pfam Leucine rich repeat 151 211 IPR001611 GO:0005515
Dod07g1335 1159 Pfam Leucine rich repeat 344 404 IPR001611 GO:0005515
Dod07g1335 1159 Gene3D Ribonuclease Inhibitor 223 295 IPR032675 -
Dod07g1335 1159 Gene3D Ribonuclease Inhibitor 296 362 IPR032675 -
Dod07g1335 1159 Gene3D Ribonuclease Inhibitor 552 636 IPR032675 -
Dod07g1335 1159 Gene3D Ribonuclease Inhibitor 363 454 IPR032675 -
Dod07g1335 1159 Gene3D Ribonuclease Inhibitor 455 551 IPR032675 -
Dod07g1335 1159 Gene3D Ribonuclease Inhibitor 637 724 IPR032675 -
Dod07g1335 1159 Gene3D Ribonuclease Inhibitor 58 218 IPR032675 -
Dod07g1335 1159 SMART serkin_6 809 1091 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1335 1159 Pfam Leucine rich repeat N-terminal domain 59 100 IPR013210 -
Dod07g1335 1159 Pfam Protein kinase domain 811 1088 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1335 1159 SUPERFAMILY Protein kinase-like (PK-like) 792 1091 IPR011009 -
Dod07g1335 1159 Gene3D Transferase(Phosphotransferase) domain 1 900 1113 - -
Dod07g1335 1159 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RCH1 26 1115 - -
Dod07g1335 1159 Gene3D Phosphorylase Kinase; domain 1 792 899 - -
Dod07g1335 1159 SMART LRR_sd22_2 415 447 - -
Dod07g1335 1159 SMART LRR_sd22_2 656 681 - -
Dod07g1335 1159 SMART LRR_sd22_2 174 206 - -
Dod07g1335 1159 SMART LRR_sd22_2 367 393 - -
Dod07g1335 1159 PRINTS Leucine-rich repeat signature 656 669 - -
Dod07g1335 1159 PRINTS Leucine-rich repeat signature 514 527 - -
Dod07g1335 1159 SUPERFAMILY L domain-like 79 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1335 Dod-Chr7 36019101 36023028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1335 60 1144 Receptor kinase-like Gene Family AT5G56040 46.279 0.0 941
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod07g1335 Pkinase 6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1335 - - gmx:100794698 1790.39