Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1334 ATGTATCAATATGTAACGCAAAGGTTACGGACTTGTCTTTCACATAGATTTTTATCAAACTTGTCTTGCAAATCTCTGCATTCATCTCCACTTGTGACTAACAACATGTCGAGCACTGCTGGTCTTGTGATTCCCTGCAAAGCTGCTGTTGCATGGGAAGCAGGTAAGCCTTTGGTGATAGAAAGAGTTGAGGTTGCTCCACCACAGGCCATGGAAGTTAGGATCAAGGTCAAGTATACTTCACTTTGCCACACTGATCTCTACTTCTGGGAGGCCAAGGAACAAAGTCCACTGTTTCCCCGAATTTTCGGTCATGAGGCAGCTGGAATTGTGGAGAGCGTTGGAGAAGGAGTCTCAGACCTGCAGGTTGGGGATCATGTGCTCCCAGTTTTCACTGGAGAATGTGGGGAATGTGCACATTGCAAATCTGAGGAGAGCAACATGTGTGACCTATTGAGAATAGATACAAACAGAGGAGTTATGCATAGTGATGGTAAAAGCAGGTTTTCAATTAATGGTACCCCAATAAACCACTTTGTTGGCACATCCACTTTTAGTGAGTACACTGTGATACACTCTGGCTGCTTAGCAAAGATCAGTCCACAAGCACCAATGGATAAAGTATGTGTCCTCAGTTGTGGTATCTCTACAGGACTAGGAGCAACTTTGAATGTAGCAAAACCAAAGAAGGGGTCTACAGTAGCAATCTTTGGTCTTGGAGCTGTTGGCCTTGCTGCTGCTGAGGGTGCAAGAATTGCTGGTGCATCCAGGATTATTGGGATTGATTTGAACCCAAACAGGTTTGAGGAAGCCAAAAGATTTGGAATAACTGAGTTTGTGAATCCGAAGGACCATGATAGGCCAGTTCAACAGGTGATTGCAGATATGACCAATGGAGGAGTAGATCGGAGTATAGAGTGCACTGGAAACATTAATGCCATGATATCTGCTTTTGAATGCGTTCATGATGGGTGGGGTGTTGCTGTGCTTGTTGGAGTACCTACCAAGGATGCAGTTTTCATGACCAAGCCCATTAATGTGCTCAACGAAAGAACACTAAAGGGAACTTTCTTTGGAAATTACAAGCCCAGGACTGACCTCCCATCCGTCGTTGATATGTATATGAACAAGACATTGGAATTGGACAAGTTTATAACCCATAGAGTTCCTTTCTCTGATATCAACAAGGCATTTGATTTAATGTTGAAAGGAGAGGGACTAAGGTGTATCATTAGCATGGGAGACTAG 1248 0.4383 MYQYVTQRLRTCLSHRFLSNLSCKSLHSSPLVTNNMSSTAGLVIPCKAAVAWEAGKPLVIERVEVAPPQAMEVRIKVKYTSLCHTDLYFWEAKEQSPLFPRIFGHEAAGIVESVGEGVSDLQVGDHVLPVFTGECGECAHCKSEESNMCDLLRIDTNRGVMHSDGKSRFSINGTPINHFVGTSTFSEYTVIHSGCLAKISPQAPMDKVCVLSCGISTGLGATLNVAKPKKGSTVAIFGLGAVGLAAAEGARIAGASRIIGIDLNPNRFEEAKRFGITEFVNPKDHDRPVQQVIADMTNGGVDRSIECTGNINAMISAFECVHDGWGVAVLVGVPTKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKTLELDKFITHRVPFSDINKAFDLMLKGEGLRCIISMGD* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1334 415 SUPERFAMILY GroES-like 363 411 IPR011032 -
Dod07g1334 415 Gene3D - 54 405 - -
Dod07g1334 415 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 204 376 IPR036291 -
Dod07g1334 415 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 104 118 IPR002328 GO:0008270|GO:0016491
Dod07g1334 415 PANTHER ALCOHOL DEHYDROGENASE 38 413 - -
Dod07g1334 415 Pfam Alcohol dehydrogenase GroES-like domain 72 196 IPR013154 -
Dod07g1334 415 SUPERFAMILY GroES-like 39 221 IPR011032 -
Dod07g1334 415 CDD alcohol_DH_plants 44 411 - -
Dod07g1334 415 Pfam Zinc-binding dehydrogenase 241 371 IPR013149 -
Dod07g1334 415 PANTHER ALCOHOL DEHYDROGENASE 1-LIKE 38 413 - -
Dod07g1334 415 Gene3D - 218 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1334 Dod-Chr7 35986949 35990897 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1334 72 405 Monolignol Biosynthesis Gene Families AT1G72680 23.009 2.85e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1334 K18857 - qsu:112034402 692.575