Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1333 ATGCATAGTCTTCAGAAGATTCGTAAGTCGTTTCAGTACCTGCGCTCACAAAACAACATACTGGCCCAATCTTCAGCATTAGTTTCTAATTTGTCTTCCACTGCTGGCAACGTGATTTCTTGCAAAGCTGCAGTTGCATGGGAAGCAGGGAAGCCATTAGTGATTGAGGATGTGGAGGTTGCTCCCCCACAAGTCAAAGAAGTAAGGATCCAGATCAAATATTCCTCACTCTGCCACACTGATCTGCACTTCTGGGAATCTCAGGGTTTGCCACCAATGTTTCCACGCATATTTGGTCATGAAGCATCTGGGGTTGTGGAGAGTGTAGGTGATGGTGTATCAGACCTCATGCCAGGGGATCATGTGCTTCCAGTGTTCACTGGGGAGTGTGGTGAATGTGCACATTGTAAGTCTGAGGAGAGCAACATGTGTGATTTGTTGAGGATAAATCCAGTAAGAGATTTCATGATCAGTGATGGAAAGTCTAGGTTCTCTGTTCATGGAAGGCCTATAAGTCACTTTCTTGGCACATCTACTTTTAGCCAGTACACTGTTGTTCATTCAGGAAGTGTAATAAAGATCAATCCCACGGCTAATTTAGACAAAGTTTGCATCCTCAGTTGCGGCATCTCAACAGGATTAGGAGCAGTTCTGAATGTTGCCAAACCAAAGAAGGGTGCTTCGATAGCAATTTTTGGGCTTGGAGCTGTTGGGCTGGCTGCAGCTGAAGGTGCAAGAATTGCTGGGGCATCCAGGATTATCGGTATTGACAAGAATCCCAGCAAAATTGAGCACGCCGAGAAATTTGGACTAACCGACTTTGTAAATCCAGAAGAACATGAAAAACCGGTTCATGAGGTCCTCAAAGAGATGACAAATGGTGGAGTTGATAGGAGTATAGAATGCACTGGAAACGTTAATGTCTTAGTGTCTGCTTTGGAAGCTGTTCATGAGGGATGGGGTGTTGCTGTCCTTGTTGGAGTACCTCGTAGTGATGCAGTTTTCAAGATTAATCCCTATAATTTCCTTGATGAAAAGACAATTACAGGTACAATCTTTGGGAATTATAAGCCTAAGAAAGGTCTTCCAGCACTGGTTGATATGTTCATGAATGATAAATTGGAGCTGGACAAGTTTATTACTCATAGGGTTCCTCTCTCTGAAATCAATAATGCCTTTGATTACATGATCAAGGGACGGGGTCTAAGGACCATCATAGACATGGACAAGTAG 1233 0.4363 MHSLQKIRKSFQYLRSQNNILAQSSALVSNLSSTAGNVISCKAAVAWEAGKPLVIEDVEVAPPQVKEVRIQIKYSSLCHTDLHFWESQGLPPMFPRIFGHEASGVVESVGDGVSDLMPGDHVLPVFTGECGECAHCKSEESNMCDLLRINPVRDFMISDGKSRFSVHGRPISHFLGTSTFSQYTVVHSGSVIKINPTANLDKVCILSCGISTGLGAVLNVAKPKKGASIAIFGLGAVGLAAAEGARIAGASRIIGIDKNPSKIEHAEKFGLTDFVNPEEHEKPVHEVLKEMTNGGVDRSIECTGNVNVLVSALEAVHEGWGVAVLVGVPRSDAVFKINPYNFLDEKTITGTIFGNYKPKKGLPALVDMFMNDKLELDKFITHRVPLSEINNAFDYMIKGRGLRTIIDMDK* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1333 410 PANTHER ALCOHOL DEHYDROGENASE 1-LIKE 33 408 - -
Dod07g1333 410 Gene3D - 49 400 - -
Dod07g1333 410 CDD alcohol_DH_plants 39 407 - -
Dod07g1333 410 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 200 371 IPR036291 -
Dod07g1333 410 SUPERFAMILY GroES-like 34 216 IPR011032 -
Dod07g1333 410 PANTHER ALCOHOL DEHYDROGENASE 33 408 - -
Dod07g1333 410 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 99 113 IPR002328 GO:0008270|GO:0016491
Dod07g1333 410 SUPERFAMILY GroES-like 359 406 IPR011032 -
Dod07g1333 410 SMART PKS_ER_names_mod 50 406 IPR020843 GO:0016491
Dod07g1333 410 Pfam Zinc-binding dehydrogenase 236 356 IPR013149 -
Dod07g1333 410 Gene3D - 213 351 - -
Dod07g1333 410 Pfam Alcohol dehydrogenase GroES-like domain 66 194 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1333 Dod-Chr7 35924195 35934801 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1333 66 144 Monolignol Biosynthesis Gene Families AT4G37970 32.500 8.66e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1333 K18857 - nnu:104602143 570.466