Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1330 ATGGAGCTTTCTATGAAATGCTTCACGCTCTGTCTTTTGCTCACTGCTCTGCTTTCACCTTGCGCCACCACCTCAATCAACGAGGGCAATGTGGGATCGGGGAGCTTGCAGAGCTCGAAGAACTCCTCTTCAATGGCGAAGAGGCCAGGTGACACTTTGAAGGAGCACGCTGTTAATAACCCAGAAGAAATAGCGTCTATGGTTGATATGAGCATTCGCAATCACACAGCGAGAAGGAACCTGAACTTCTTCTCATGTGGAACCGGGAACCCAATTGATGACTGCTGGCGCTGCGACCGCCGATGGTATGCTCGCCGAAAGCGCCTGGCCGATTGCGGCATCGGTTTCGGCCGCAATGCCATCGGCGGCCGCGACGGCCGTTACTATGTCGTAACCGACCCGGCAGACGACGACCCCGTCAACCCCAAACCAGGCACTCTCCGCCACGCAGTTATCCAAGACAGGCCACTATGGATAGTCTTCAAGAGGGACATGGTGATCACATTGAAACAGGAGCTCATCATGAACAGCTTCAAGACCATCGATGGTCGGGGTGCTAACGTGCACATTGCTTATGGTGCTTGCCTTACGCTCCAGTTCATCACCAATGTCATCATTCATGGCTTGCATATTCATGACTGCAAGCCAACTGGGAATGCTATGGTGCGAAACTCGCCTTCGCATTATGGGTGGAGGACCATGGCTGATGGGGATGGGATCTCCATCTTTGGTTCGAGTCACATTTGGATTGACCATAACTCCCTGTCTAATTGCGCCGATGGGCTCATTGATGCTATTATGGGATCGACTGCTATTACCATTTCCAACAACTATTTTACCCACCATAATGAGGTTATGCTACTGGGTCACAGTGACTCCTATGTCCGAGACAAGCAGATGCAAGTAACTATTGCCTACAACCATTTTGGGGAGGGTCTTATGCAAAGAATGCCTAGGTGCAGACATGGGTATTTCCACGTGGTAAACAATGACTATACCCACTGGGAGATGTATGCAATTGGTGGCAGTGCTGAACCCACAATTAACAGCCAGGGCAACAGATACCTTGCCCCTCTGAACCCTTTTGCTAAGGAGGTGACAAAGAGGGTGGACACAGGGGAACAAGTATGGAAAGGGTGGAATTGGAGGTCTGAGGGAGACCTTCTTCTGAATGGAGCTTTTTTCACTTCATCAGGAGCTGGATCTGCATCAAGCTATGCCAGAGCCTCAAGTCTTGGTGCCAAATCCTCTTCTTTAGTTGGAACCATTACCTCTGGTTCTGGTGTTCTTAACTGCCGCAGGGGCTCCATGTGTTAA 1317 0.5049 MELSMKCFTLCLLLTALLSPCATTSINEGNVGSGSLQSSKNSSSMAKRPGDTLKEHAVNNPEEIASMVDMSIRNHTARRNLNFFSCGTGNPIDDCWRCDRRWYARRKRLADCGIGFGRNAIGGRDGRYYVVTDPADDDPVNPKPGTLRHAVIQDRPLWIVFKRDMVITLKQELIMNSFKTIDGRGANVHIAYGACLTLQFITNVIIHGLHIHDCKPTGNAMVRNSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAITISNNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGEGLMQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYLAPLNPFAKEVTKRVDTGEQVWKGWNWRSEGDLLLNGAFFTSSGAGSASSYARASSLGAKSSSLVGTITSGSGVLNCRRGSMC* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1330 438 SMART amb_all 164 361 IPR002022 -
Dod07g1330 438 MobiDBLite consensus disorder prediction 32 48 - -
Dod07g1330 438 PRINTS Pollen allergen Amb family signature 112 129 IPR018082 -
Dod07g1330 438 PRINTS Pollen allergen Amb family signature 136 161 IPR018082 -
Dod07g1330 438 PRINTS Pollen allergen Amb family signature 380 404 IPR018082 -
Dod07g1330 438 PRINTS Pollen allergen Amb family signature 236 257 IPR018082 -
Dod07g1330 438 PRINTS Pollen allergen Amb family signature 338 357 IPR018082 -
Dod07g1330 438 PRINTS Pollen allergen Amb family signature 316 335 IPR018082 -
Dod07g1330 438 PRINTS Pollen allergen Amb family signature 409 432 IPR018082 -
Dod07g1330 438 PRINTS Pollen allergen Amb family signature 172 188 IPR018082 -
Dod07g1330 438 MobiDBLite consensus disorder prediction 32 54 - -
Dod07g1330 438 PANTHER PECTATE LYASE 35 435 - -
Dod07g1330 438 Pfam Pectate lyase 173 353 IPR002022 -
Dod07g1330 438 SUPERFAMILY Pectin lyase-like 67 432 IPR011050 -
Dod07g1330 438 PANTHER PECTATE LYASE 18-RELATED 35 435 IPR045032 GO:0030570
Dod07g1330 438 Gene3D - 89 431 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1330 Dod-Chr7 35865928 35872956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1330 39 438 Polysaccharide Lyase AT4G13710 78.676 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1330 K01728 - gmx:100809277 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1330 07 35865928 35872956 Dod07g1330 07 35865928 35872956 ECH