Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1328 ATGGTGGTGATAGAACAACAGCAAGAGACTGAGGAGAAGAAGGAGCACGCCGCAATTCCTCACAACGCCGCCGACGCCGGCAAGGACGTTTCCGACGGCTTCGAAACCGCCAGCGACACCGAGCTCGGCGGCGACAACGACGGCGGCGCCGGCGGAGGGGAGGTGCACGGACAACATTCATGTCAGCAAGAGCAAGAGCAAGAGCAAGAGAAGGATCGCGGTTCCGACGATGCGTCGAACAGTGAGGAATTGGAACAGAAAGCAGTATCTCAAGCAAATGAAGCGAAGTTAGAAGGGAACAAACTTTTTGGAGATGGGAGGTACGAGGAGGCGCTGTCACAGTATGAAATTGCTTTGCAGGTAGCACCAGACACGCCTTCATCTGTGGAAATACGTTCGATATGTCATGCAAACCGTGGTGTGTGCTTCCTGAAACTGGGACAATATGAAAACACAATCAAAGAATGCACCAAAGCAGTAGAATTGAATCCTTTGTACGTTAAAGCTTTGGTAAGAAGAGGAGAGGCGCATGAAAAGCTTGAACGTTTCGAAGAGGCCATTTCTGATATGAAGAAGATCTTAGAAATTGATCCTTCAAATGATCAAGCTAGGAAAGCCATTCGCCGTTTGGAGCCTCTTGCTGCAGAAAAGCGGGAAAAGATGAAGGAAGAAATGATTGCTAAACTGAAGGAAATGGGCAATTCAGTACTGGGTCGCTTTGGGATGAGCGTAGACAACTTTAAAGCTGTCAAAGATCCAAACACTGGCTCCTATTCTATCTCTTTCCAACGCTAA 795 0.4843 MVVIEQQQETEEKKEHAAIPHNAADAGKDVSDGFETASDTELGGDNDGGAGGGEVHGQHSCQQEQEQEQEKDRGSDDASNSEELEQKAVSQANEAKLEGNKLFGDGRYEEALSQYEIALQVAPDTPSSVEIRSICHANRGVCFLKLGQYENTIKECTKAVELNPLYVKALVRRGEAHEKLERFEEAISDMKKILEIDPSNDQARKAIRRLEPLAAEKREKMKEEMIAKLKEMGNSVLGRFGMSVDNFKAVKDPNTGSYSISFQR* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1328 264 Pfam Tetratricopeptide repeat 168 200 IPR013105 -
Dod07g1328 264 Pfam Tetratricopeptide repeat 135 164 IPR001440 GO:0005515
Dod07g1328 264 ProSiteProfiles TPR repeat profile. 167 200 IPR019734 GO:0005515
Dod07g1328 264 ProSiteProfiles TPR repeat profile. 92 125 IPR019734 GO:0005515
Dod07g1328 264 Gene3D Tetratricopeptide repeat domain 54 231 IPR011990 GO:0005515
Dod07g1328 264 MobiDBLite consensus disorder prediction 61 83 - -
Dod07g1328 264 ProSiteProfiles TPR repeat profile. 133 166 IPR019734 GO:0005515
Dod07g1328 264 SUPERFAMILY TPR-like 90 211 IPR011990 GO:0005515
Dod07g1328 264 MobiDBLite consensus disorder prediction 7 22 - -
Dod07g1328 264 ProSiteProfiles TPR repeat region circular profile. 167 200 - -
Dod07g1328 264 SMART tpr_5 133 166 IPR019734 GO:0005515
Dod07g1328 264 SMART tpr_5 167 200 IPR019734 GO:0005515
Dod07g1328 264 SMART tpr_5 92 125 IPR019734 GO:0005515
Dod07g1328 264 MobiDBLite consensus disorder prediction 1 93 - -
Dod07g1328 264 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 6 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1328 Dod-Chr7 35782667 35789662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1328 70 223 Calmodulin-binding Proteins AT3G25230 37.037 2.48e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1328 K24926 - gmx:100808386 350.132