Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1320 ATGAGAAATGAGGAGAGTTTGAGAGAGAAATCAGAGGAAAAAAAGACGAAAACTGAAGCAGAGCTAATTGAAGTTGTCGTCCAGCGTGTGTTGACAAGGTTGAATCATATGTATCAAGTTGATTTCAAAGGCCTTGTTGGAATTGATGAACCAATTGCAGATCTTCGGTCATTATTATTGCGAAACATATCAAAAGATGTTCATATTATAGGAATTTGGGGCATGGGTGGTATTGGTAAGACAACTATTGCCGGTGCATTATTTAGCATATTATGTTCTGAGCATGAAAATTCCTATTTTCTAGCAAATGTGAGAGAACGATCAGAGAAGAACGGAATAATTCAATTGCGAGAAAAACTTCTATCCATATTATTAGAGGAAAAATATCTAAACATTGATGTTCTTGATGGAACACTACCAGCTCATGTTCTAAGAAGACTTCGTCGCAAAAAGGTTCTTCTTGTTCTTGATGATGTCAATAGTCTAGATCACATTACAAGCTTAGTTGGAGGACATGATTGGTTCGGTTCAGGTAGTAGAATCATCGTCACAACTAGAGATAAGCATGTGCTTTGTAAAGAAGCTGATGACATATATGAAGTTAAGGCATTAGGAGATCAAAAATCTCTACAACTTCTAAATTTGCATGCCTTTAACACAAAGTGCCTCCAAATAAATTGGCATAATCTGATGCATAAAGTGGTTGCATATGCTAAAGGCATCCCATTAGCTTTGAGAGTTTTGGGTTCTTTTCTTTATGGCAAAAGTGTTGAAGAATGGGAAAGCTTATTGCAGAAACTTCAAAAAATGTCATTTCCAGAAATTCAGAATATTTTGAGATTGAGTTATGAAGGACTAGATCGGGAAGAGAAGAGTATATTTTTATATATTTCTTGTTTCTTCCACTGTGATAGAGGATATCACATCAAAACTTTACTAGATGCATGTGGTTACTCAACGACTATTGCTTTAAAAACTCTTCAAGATAAATCTCTTGTGACTATTTCAAGAATTGAATATGTGACTGTGCATGACTTAATTCGAGAAATGGGTCGAGAAATTGTTCGAGAACAAAGTATTGGAAATCCTGGGGAACGAAGTCATTTATGGGATTCTAATGACATTTGTCGTGTGTTGGAAAATGATGAGGGCACTGAGCATATTGAAAGCATTACCTTGAACCTGACAAGATTTGGTGACCTGAGTATAAGTCCTCACGCATTTGCTAGAATGCCCAATCTAAAGCTATTAAGAATTCATAATTCACATACAGATAGCAAGGTCCATCTTCCAAAAGGCCTTCAAATTCTGTCAGATAAAATAAGACTTCTTCATTGGGATAACTATCCATGTAAGTCATTCCCAACGACATTCAATGCAGAGTACCTCGTTGAACTTCACATGCCATATAGTCGTGTCAAAAAACTTTGGAATGGTGCACCGGATTAA 1449 0.3616 MRNEESLREKSEEKKTKTEAELIEVVVQRVLTRLNHMYQVDFKGLVGIDEPIADLRSLLLRNISKDVHIIGIWGMGGIGKTTIAGALFSILCSEHENSYFLANVRERSEKNGIIQLREKLLSILLEEKYLNIDVLDGTLPAHVLRRLRRKKVLLVLDDVNSLDHITSLVGGHDWFGSGSRIIVTTRDKHVLCKEADDIYEVKALGDQKSLQLLNLHAFNTKCLQINWHNLMHKVVAYAKGIPLALRVLGSFLYGKSVEEWESLLQKLQKMSFPEIQNILRLSYEGLDREEKSIFLYISCFFHCDRGYHIKTLLDACGYSTTIALKTLQDKSLVTISRIEYVTVHDLIREMGREIVREQSIGNPGERSHLWDSNDICRVLENDEGTEHIESITLNLTRFGDLSISPHAFARMPNLKLLRIHNSHTDSKVHLPKGLQILSDKIRLLHWDNYPCKSFPTTFNAEYLVELHMPYSRVKKLWNGAPD* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1320 482 Gene3D - 10 200 IPR027417 -
Dod07g1320 482 PRINTS Disease resistance protein signature 69 84 - -
Dod07g1320 482 PRINTS Disease resistance protein signature 146 160 - -
Dod07g1320 482 PRINTS Disease resistance protein signature 238 252 - -
Dod07g1320 482 Gene3D Ribonuclease Inhibitor 371 480 IPR032675 -
Dod07g1320 482 Coils Coil 1 21 - -
Dod07g1320 482 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 479 IPR044974 GO:0006952
Dod07g1320 482 Pfam Leucine Rich Repeat 462 479 IPR011713 -
Dod07g1320 482 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 297 IPR027417 -
Dod07g1320 482 Gene3D - 203 287 IPR042197 -
Dod07g1320 482 Pfam NB-ARC domain 55 284 IPR002182 GO:0043531
Dod07g1320 482 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 11 479 - -
Dod07g1320 482 SUPERFAMILY L domain-like 343 472 - -
Dod07g1320 482 SUPERFAMILY "Winged helix" DNA-binding domain 274 380 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1320 Dod-Chr7 35582729 35587006 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1320 17 479 WRKY Transcription Factor Family AT4G12020 39.103 1.74e-85 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1320 - - ahf:112730190 571.622