Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1313 ATGACCTTGGTTTCCCCACGTAGAGCCTTTGAACTTGGTTTCTTCAGCCCTGGGAATTCCAACAAGCGTTACTTAGGAATCTGGTACAAGAACATCCTAGGCACCTTGGAAGCTTGGTATTCACTGGCCTCATTTTCACGAGCATCATCCAATGGCATTCACTGGCCCCATTTTCACGGGAAAATTCTAAGCCTGGTATCCATCAACACCAAGAATCGTATTCACGAGCACTCAAGATTGGTATTTACCAGTACCCAAGACAAGTATTCGCAAGCACCCAAGATCAGCCTTAAGACTAGGGGGCTTGTGGACCGGTCGGCAGTAGCCCAACCTACACCTTTAGATCTTTGGCCTTCATCCTTGAGTCTCTTCGACCCTCTGGATTCAAGACTGGGGACCATAAGGAACCCCACGAAAATAAATCGGACCACCAAACACGTTAAATGCGGAAAATATCTATCACCTCCCGTCATTGACATTGCCTTCGACCGTCACTCATTAGCTTCCATCGCAGTTGATTCCATTGCTGATTCTAAGTTCATAAGTGATGGCATGACCTTGGTTTCCCCAGGTAGAACCTTTGAACTTGGTTTCTTCAGCCCTGGCAATTCCAACAAGCGTTACTTAGGAATTTGGTACAAGAACATCCCAGGTAAGACGGTTGTTTGGGTTGCAAACCGCCTCAATCCAATCAATGACACATCTGGCACCTTAACAGTGAACAGCACTGGCAGTCTTGTGCTTAGCCAGAATGGCACTGTGGTTTGGTATACCACAATTATGTCTCAAAAACAACCGAATAATCCTATTGCTAAGCTCTTGGATTCTGGAAATTTTGTGGTATGGGATGAGAAAGAAGCAAACCAAGAAGAGTTGTACTTGTGGCAAAGCTTTGATTATCCATCTGATACAATGTTGCCAGGGATGAAACTTGGATGGAACCTGAAGAAGGGCCTGAATTGGACACTATCTGCTTGGAAGAGTCCTAATGATTCTGCACCAGGAGACTTTACTTGCGTTTCTTCTCAAAGTGCCTACCCTGAGGGATATCTGATGAAGGGAGCAGAAAAGTATTGCCGATTCGGACCATGGAATGGCCTCTTGTCAAGTGGTTCTCCACAAATAAACAGCAACTCTGTCTATAGTTTCAATTTTGTAAGCAATAAAGATGAGTTCTCCTACACATACCACCTCACAAATAATTCTGTCATCTCAAGATTAGTGATGAACCAAACTGATTATACTCGCTATCGATTCGTGTGGGTGGGAGCTGATCAAAGTTGGAGGGTTTATGCATCAAAGCCGGTAGACTATTGTGACCATTATGGCCTGTGTGGTGCCAATGGGAATTGTATCATTACTGAAACACCAATTTGCCAGTGTTTAAGTGGGTTTAGGCCTAAGTCACCACAGGAATGGAACTCAATGGAATGGTCTCAAGGATGTGTTCGCGATGCACCGATGAGCTGCAAGGACAAACTCACGGATGGATTTGTGAAGATGGTGGGATTGAAAGTGCCGGATACTACGCATACTTGGTTGGATGAGACAATTGGTCTGGAGGAATGCAGAGCCAAGTGCTTGAAAAACTGTTCTTGTATGGCCTATACAAATTCAGATATCAGTGGGAAAGGGAGTGGTTGTGTCATGTGGTTTGGTGATCTAATTGATATTAGAAATATGGGATCTGATGAGCAATACTTCTATGTTCGAATGGCTGCTTCGGAATTAGAGATGGAATACAACCACAGAAACAAGTTGAAAACCATAGTTGCCTGCACAACTGTTGGGATTGCCGGGGTGCTTATAGTTGGCTGCTATGTTATCTACAGAGTCCGCAAAAACATATCTGAGAAATTGACAACTGGAGATCAAAACAATGGAGGACCCGAGGATGATCTTGATCTCCCATTGTTTAGCCAGTCAACATTAGCTAGTGCCACCAATAACTTTTCAGAGAAGAACAAAATCGGGGAAGGTGGATTTGGACCTGTTTACATGGGAAGATTAGTAGATGGGAAAGATATTGCTGTGAAGAGGCCTTCATGTAACTCAGGACAAGGACTAGCTGAGTTCATGAATGAGGTAAAGCTTATTGCAAAGCTTCAGCATCGGAATCTTGTGAAACTTCTTGGCTGTTGCATCCAGGGACAAGAACAAATGCTGGTTTATGAATTTATGCCAAATAGCAGTTTGGACACCTTCATTTTTGATGAGAGCAAAGGGAAGTTGTTAGATTGGCCCAAGCGCTTCCACATCATTGCTGGAGTTGCTCGGGGTCTCATGTACCTTCATCACGATTCAAGATTGAGAATAATTCATAGAGATCTCAAAGCAAGTAATGTTTTACTTGATGATAAATTGAATGCAAAAATATCAGATTTTGGCATAGCTAGAACTTTCGGAGGAGAGCAAATGGAAGGAAGCACAAGGAGAATTGTGGGGACCTATGGTTACATGGCACCTGAATATGTCGCTCAAGGGCTATTTTCAGTTAAATCCGATGTATTTAGTTTTGGTATTTTGGTGATGGAGATTGTATATGGGAAGAAAAGTAGAGGGTTTTATGACTCTTACCAAAGCCACAACCTTATTGGTCACGCGTGGACTCTTTGGATGGAAGGAAGGGCAATAGAACTGATTGACAAAAACATTGAAGACTCACGGGTTGTATCTGAAGTATTACGTTGCATTCATGTTAGTCTCTTGTGTGTTCAACAGCTTCCAAAAGATAGGCCAAACATGTCAGATGTTCTTTTAATGTTGGTAAGTGAGGTAGAAATTCCTGAGCCTAAACAGCCTGGTTTCTTCTTGGGAAACTTCACATTGCAAGCAAATTCCCCATCAAATCAATTGCTGTTTGGGTCAACCAATGAAATCTCTAGGACTTTACTTGAAGCCAGATGA 2907 0.4297 MTLVSPRRAFELGFFSPGNSNKRYLGIWYKNILGTLEAWYSLASFSRASSNGIHWPHFHGKILSLVSINTKNRIHEHSRLVFTSTQDKYSQAPKISLKTRGLVDRSAVAQPTPLDLWPSSLSLFDPLDSRLGTIRNPTKINRTTKHVKCGKYLSPPVIDIAFDRHSLASIAVDSIADSKFISDGMTLVSPGRTFELGFFSPGNSNKRYLGIWYKNIPGKTVVWVANRLNPINDTSGTLTVNSTGSLVLSQNGTVVWYTTIMSQKQPNNPIAKLLDSGNFVVWDEKEANQEELYLWQSFDYPSDTMLPGMKLGWNLKKGLNWTLSAWKSPNDSAPGDFTCVSSQSAYPEGYLMKGAEKYCRFGPWNGLLSSGSPQINSNSVYSFNFVSNKDEFSYTYHLTNNSVISRLVMNQTDYTRYRFVWVGADQSWRVYASKPVDYCDHYGLCGANGNCIITETPICQCLSGFRPKSPQEWNSMEWSQGCVRDAPMSCKDKLTDGFVKMVGLKVPDTTHTWLDETIGLEECRAKCLKNCSCMAYTNSDISGKGSGCVMWFGDLIDIRNMGSDEQYFYVRMAASELEMEYNHRNKLKTIVACTTVGIAGVLIVGCYVIYRVRKNISEKLTTGDQNNGGPEDDLDLPLFSQSTLASATNNFSEKNKIGEGGFGPVYMGRLVDGKDIAVKRPSCNSGQGLAEFMNEVKLIAKLQHRNLVKLLGCCIQGQEQMLVYEFMPNSSLDTFIFDESKGKLLDWPKRFHIIAGVARGLMYLHHDSRLRIIHRDLKASNVLLDDKLNAKISDFGIARTFGGEQMEGSTRRIVGTYGYMAPEYVAQGLFSVKSDVFSFGILVMEIVYGKKSRGFYDSYQSHNLIGHAWTLWMEGRAIELIDKNIEDSRVVSEVLRCIHVSLLCVQQLPKDRPNMSDVLLMLVSEVEIPEPKQPGFFLGNFTLQANSPSNQLLFGSTNEISRTLLEAR* 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1313 968 ProSiteProfiles Protein kinase domain profile. 651 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1313 968 Pfam Protein tyrosine and serine/threonine kinase 654 919 IPR001245 GO:0004672|GO:0006468
Dod07g1313 968 Gene3D Phosphorylase Kinase; domain 1 629 726 - -
Dod07g1313 968 SUPERFAMILY Protein kinase-like (PK-like) 635 922 IPR011009 -
Dod07g1313 968 Pfam PAN-like domain 492 558 IPR003609 -
Dod07g1313 968 CDD PAN_AP_plant 487 573 - -
Dod07g1313 968 Pfam S-locus glycoprotein domain 360 469 IPR000858 GO:0048544
Dod07g1313 968 Gene3D Transferase(Phosphotransferase) domain 1 727 930 - -
Dod07g1313 968 SMART ntp_6 493 572 IPR003609 -
Dod07g1313 968 PANTHER - 171 965 - -
Dod07g1313 968 SMART serkin_6 651 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1313 968 ProSiteProfiles PAN/Apple domain profile. 490 574 IPR003609 -
Dod07g1313 968 ProSiteProfiles EGF-like domain profile. 435 471 IPR000742 -
Dod07g1313 968 SMART blect_4 178 301 IPR001480 -
Dod07g1313 968 Pfam D-mannose binding lectin 220 327 IPR001480 -
Dod07g1313 968 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 171 965 - -
Dod07g1313 968 SUPERFAMILY alpha-D-mannose-specific plant lectins 221 331 IPR036426 -
Dod07g1313 968 CDD B_lectin 178 301 IPR001480 -
Dod07g1313 968 ProSiteProfiles Bulb-type lectin domain profile. 172 294 IPR001480 -
Dod07g1313 968 Gene3D - 167 298 IPR036426 -
Dod07g1313 968 ProSitePatterns Serine/Threonine protein kinases active-site signature. 772 784 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1313 Dod-Chr7 35213458 35221699 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1313 595 936 Receptor kinase-like Gene Family AT4G23230 53.198 6.04e-119 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod07g1313 PK_Tyr_Ser-Thr 1.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1313 - - gmx:100775648 1049.27