Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1301 ATGCAGAGACATGAAACAGGCACTACGCAGGATGTTGATTTTGAATCGGCAGAAGCAAAAAGGCAAGCTCGTGGGTCAACATCTACGAAGAGATCCCATGCTGCAGAGAGGCGTCGTCATCGGATTAATAAAAGGATGAGAGCTCTGCAAGAACTTATACCTCATTGTAATAAGGTTGCTTCGCTGCTACCGCGAGAAGCTTTCTCTGTTCTTAGGAACTCATTTGATGTTAGGAAGGTATGGGTGGGGTTGGTTACATTTGGCCTAAATGTGAAGGAGGCCATGACGAACAGAGGAAGCATTCAGTGGCGCCTATTCCTCTAG 324 0.466 MQRHETGTTQDVDFESAEAKRQARGSTSTKRSHAAERRRHRINKRMRALQELIPHCNKVASLLPREAFSVLRNSFDVRKVWVGLVTFGLNVKEAMTNRGSIQWRLFL* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1301 107 MobiDBLite consensus disorder prediction 1 40 - -
Dod07g1301 107 Gene3D - 15 78 IPR036638 GO:0046983
Dod07g1301 107 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 9 69 IPR031066 -
Dod07g1301 107 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 29 72 IPR036638 GO:0046983
Dod07g1301 107 MobiDBLite consensus disorder prediction 1 20 - -
Dod07g1301 107 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 26 81 IPR011598 GO:0046983
Dod07g1301 107 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 9 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1301 Dod-Chr7 35032860 35035800 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1301 5 73 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G20180 47.436 2.30e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1301 - K16189 cpap:110821587 81.6481