Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1276 ATGGAAAATATCGTAGACCATGATTTCGCAGTGAATGAGGGGCTTCAAAATGACGCCACTATGCTCCATGATGATTTCCCTCCACTTCTTGATTTCCCATGCATGTTACCATTACCATCTTCATCTTCTTCTTCTCCATCAGCACTAACACCACCACCGCCATCCTCATCTTTAGATTCTTCTTCATTGTCCTCATTAGGTTCCTCATCATCACAGGGGGTTATGAAGGAAGACATGAAGAAAAGGAACAACAACAACAACAGTAATTACTACATCAACAACCAGCATGACACATTAGAAGCACTACCGAATGATGCTTTTGATGTTGGCATTGGTGATTGCATGGATGTGATGGAGGAGCCTCTTGGGTTCATAGACCTCTTGGAAAACAACGATTTCTTAGGCCTAGAATTGATTTTCCAAAACCATGTTGAAAACCCATTATCATTAGAGGAACAAGCACAACAATATGAAGTAGTAGCATCAGAGCATCAACAACCAGCATCACCAACACAAGAGCCAGGGGAATTAGGTGGCAACAACAACGTGACAACAAGCAAAGAGCACGAGATCCAAGGAGGAGAAGATGCCCCAGATGATGAAATGAGGAATGTGTTCTTGGAGTGGCTTAAGTCCAACAAGGATATTGTCTCTGCCAACGACTTGAGGAGTGTGAAGTTCAAGAAGGCAACCATAGAGTGTGCTGCTCGGAGTTTGGGTGGAGGAAAAGAAGGCATGAAGAAATTGCTCAAGCTTATTCTTGAATGGGTTCAAACGACCCACCTTAAGAACAAGAAGTGTAAGAACAACAACACACCCTCTGATGTTCCTAGCCAAAACCCCACCACCTTTGTTTTGAACCCAACTCCATCATTTGGGACTGAATCAAGCCCTTCTTTCAACCAATCACCATGGATTTCTCAGCCACCTTATGGGGCTGATCCAGGTGCCATTGTGCAATATTCACAACCCATGGTTCGGCATGTGGGTGATCCTCATACAAATGGTGCTTCGAATTGTGTCAATGGCACTCACAATCATAACACTGCTTACCTTGCTGGCACTGAATATAATAATAATGTATTGGAATCATCAAATCCATGGTCTAATTCTCACTACAACCAGTCATTTGGGGGCAATACTTTTCACCTTTCCTTGACTTTTTCGAGTTATGGCAATCAACACCCTTGTCAATGGAAGAGATTGGCTACCAAAGCGGCAAGGAAGAAAAGGATGGCTAGGCAAAGAAAGTACTTCTCACATCACAGGAACCACAATCACCATGGCCAAACACATGACGAGCACCAATACTCCCACCAAGACCAAACTGTTGATTCGGGAATTGGAAATGATAATTGTTGTGCTGTTGTGGCAGCAGCACCACATGCAAATCCTACAGCTAATTGGGTGTATCCGCAGGCTATGGCTCGTGGGGCAGCTTCAATAATGGCCGCAACGCCGGTGATGGCAGCTGAACCGCCGCCGACGAAATCGACAATTAATCGAATTGCCATACAAAGCCAGAATTGGTATCAGGGTCATGGATCATTGGATAGGCAATCACAAGTGGGATGGAAGCCTGAGAAGAACTTGAAATTTCTCTTGCAAAAGGTTTTGAAGCAAAGTGATGTTGGTAGCTTGGGGAGGATAGTTTTACCAAAAAAAGAGGCAGAAACCCATTTGCCAGAATTGGAGGCAAGAGATGGCATTTCCATTGAAATGGAAGACATTGCAACTTCTCATATGTGGAATATGCGCTATAGATACTGGCCAAACAACAAAAGCAGAATGTATGTGCTTGAGAACACTGGGGACTTTGTGAGAGCTAATGGACTCCAAGAGGGAGACTTCATAGTGATATATTCAGATGTGAAATGTGACAAATTTTGTGTTTTGAATAATTGTGAAAGTGCTGGTAACTTGAAAGCTAAAAAGGAAATGAAAGATGAGATTGAGTTTGATGTTCTTAAGGTTTTGGAAAAGAAGTAG 1989 0.4304 MENIVDHDFAVNEGLQNDATMLHDDFPPLLDFPCMLPLPSSSSSSPSALTPPPPSSSLDSSSLSSLGSSSSQGVMKEDMKKRNNNNNSNYYINNQHDTLEALPNDAFDVGIGDCMDVMEEPLGFIDLLENNDFLGLELIFQNHVENPLSLEEQAQQYEVVASEHQQPASPTQEPGELGGNNNVTTSKEHEIQGGEDAPDDEMRNVFLEWLKSNKDIVSANDLRSVKFKKATIECAARSLGGGKEGMKKLLKLILEWVQTTHLKNKKCKNNNTPSDVPSQNPTTFVLNPTPSFGTESSPSFNQSPWISQPPYGADPGAIVQYSQPMVRHVGDPHTNGASNCVNGTHNHNTAYLAGTEYNNNVLESSNPWSNSHYNQSFGGNTFHLSLTFSSYGNQHPCQWKRLATKAARKKRMARQRKYFSHHRNHNHHGQTHDEHQYSHQDQTVDSGIGNDNCCAVVAAAPHANPTANWVYPQAMARGAASIMAATPVMAAEPPPTKSTINRIAIQSQNWYQGHGSLDRQSQVGWKPEKNLKFLLQKVLKQSDVGSLGRIVLPKKEAETHLPELEARDGISIEMEDIATSHMWNMRYRYWPNNKSRMYVLENTGDFVRANGLQEGDFIVIYSDVKCDKFCVLNNCESAGNLKAKKEMKDEIEFDVLKVLEKK* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1276 662 SMART B3_2 535 638 IPR003340 GO:0003677
Dod07g1276 662 CDD BfiI_C_EcoRII_N_B3 533 629 - -
Dod07g1276 662 Gene3D - 526 644 IPR015300 -
Dod07g1276 662 MobiDBLite consensus disorder prediction 41 92 - -
Dod07g1276 662 Pfam B3 DNA binding domain 536 628 IPR003340 GO:0003677
Dod07g1276 662 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 18 637 - -
Dod07g1276 662 MobiDBLite consensus disorder prediction 161 199 - -
Dod07g1276 662 MobiDBLite consensus disorder prediction 161 188 - -
Dod07g1276 662 ProSiteProfiles B3 DNA-binding domain profile. 535 637 IPR003340 GO:0003677
Dod07g1276 662 MobiDBLite consensus disorder prediction 54 74 - -
Dod07g1276 662 SUPERFAMILY DNA-binding pseudobarrel domain 534 632 IPR015300 -
Dod07g1276 662 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 18 637 IPR044800 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1276 Dod-Chr7 34111836 34117975 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1276 15 631 B3 DNA Binding Superfamily AT3G24650 39.640 7.52e-107 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Dod07g1276 B3 2.4e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1276 - - gmx:100795226 510.375