LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod07g1276	ATGGAAAATATCGTAGACCATGATTTCGCAGTGAATGAGGGGCTTCAAAATGACGCCACTATGCTCCATGATGATTTCCCTCCACTTCTTGATTTCCCATGCATGTTACCATTACCATCTTCATCTTCTTCTTCTCCATCAGCACTAACACCACCACCGCCATCCTCATCTTTAGATTCTTCTTCATTGTCCTCATTAGGTTCCTCATCATCACAGGGGGTTATGAAGGAAGACATGAAGAAAAGGAACAACAACAACAACAGTAATTACTACATCAACAACCAGCATGACACATTAGAAGCACTACCGAATGATGCTTTTGATGTTGGCATTGGTGATTGCATGGATGTGATGGAGGAGCCTCTTGGGTTCATAGACCTCTTGGAAAACAACGATTTCTTAGGCCTAGAATTGATTTTCCAAAACCATGTTGAAAACCCATTATCATTAGAGGAACAAGCACAACAATATGAAGTAGTAGCATCAGAGCATCAACAACCAGCATCACCAACACAAGAGCCAGGGGAATTAGGTGGCAACAACAACGTGACAACAAGCAAAGAGCACGAGATCCAAGGAGGAGAAGATGCCCCAGATGATGAAATGAGGAATGTGTTCTTGGAGTGGCTTAAGTCCAACAAGGATATTGTCTCTGCCAACGACTTGAGGAGTGTGAAGTTCAAGAAGGCAACCATAGAGTGTGCTGCTCGGAGTTTGGGTGGAGGAAAAGAAGGCATGAAGAAATTGCTCAAGCTTATTCTTGAATGGGTTCAAACGACCCACCTTAAGAACAAGAAGTGTAAGAACAACAACACACCCTCTGATGTTCCTAGCCAAAACCCCACCACCTTTGTTTTGAACCCAACTCCATCATTTGGGACTGAATCAAGCCCTTCTTTCAACCAATCACCATGGATTTCTCAGCCACCTTATGGGGCTGATCCAGGTGCCATTGTGCAATATTCACAACCCATGGTTCGGCATGTGGGTGATCCTCATACAAATGGTGCTTCGAATTGTGTCAATGGCACTCACAATCATAACACTGCTTACCTTGCTGGCACTGAATATAATAATAATGTATTGGAATCATCAAATCCATGGTCTAATTCTCACTACAACCAGTCATTTGGGGGCAATACTTTTCACCTTTCCTTGACTTTTTCGAGTTATGGCAATCAACACCCTTGTCAATGGAAGAGATTGGCTACCAAAGCGGCAAGGAAGAAAAGGATGGCTAGGCAAAGAAAGTACTTCTCACATCACAGGAACCACAATCACCATGGCCAAACACATGACGAGCACCAATACTCCCACCAAGACCAAACTGTTGATTCGGGAATTGGAAATGATAATTGTTGTGCTGTTGTGGCAGCAGCACCACATGCAAATCCTACAGCTAATTGGGTGTATCCGCAGGCTATGGCTCGTGGGGCAGCTTCAATAATGGCCGCAACGCCGGTGATGGCAGCTGAACCGCCGCCGACGAAATCGACAATTAATCGAATTGCCATACAAAGCCAGAATTGGTATCAGGGTCATGGATCATTGGATAGGCAATCACAAGTGGGATGGAAGCCTGAGAAGAACTTGAAATTTCTCTTGCAAAAGGTTTTGAAGCAAAGTGATGTTGGTAGCTTGGGGAGGATAGTTTTACCAAAAAAAGAGGCAGAAACCCATTTGCCAGAATTGGAGGCAAGAGATGGCATTTCCATTGAAATGGAAGACATTGCAACTTCTCATATGTGGAATATGCGCTATAGATACTGGCCAAACAACAAAAGCAGAATGTATGTGCTTGAGAACACTGGGGACTTTGTGAGAGCTAATGGACTCCAAGAGGGAGACTTCATAGTGATATATTCAGATGTGAAATGTGACAAATTTTGTGTTTTGAATAATTGTGAAAGTGCTGGTAACTTGAAAGCTAAAAAGGAAATGAAAGATGAGATTGAGTTTGATGTTCTTAAGGTTTTGGAAAAGAAGTAG	1989	0.4304	MENIVDHDFAVNEGLQNDATMLHDDFPPLLDFPCMLPLPSSSSSSPSALTPPPPSSSLDSSSLSSLGSSSSQGVMKEDMKKRNNNNNSNYYINNQHDTLEALPNDAFDVGIGDCMDVMEEPLGFIDLLENNDFLGLELIFQNHVENPLSLEEQAQQYEVVASEHQQPASPTQEPGELGGNNNVTTSKEHEIQGGEDAPDDEMRNVFLEWLKSNKDIVSANDLRSVKFKKATIECAARSLGGGKEGMKKLLKLILEWVQTTHLKNKKCKNNNTPSDVPSQNPTTFVLNPTPSFGTESSPSFNQSPWISQPPYGADPGAIVQYSQPMVRHVGDPHTNGASNCVNGTHNHNTAYLAGTEYNNNVLESSNPWSNSHYNQSFGGNTFHLSLTFSSYGNQHPCQWKRLATKAARKKRMARQRKYFSHHRNHNHHGQTHDEHQYSHQDQTVDSGIGNDNCCAVVAAAPHANPTANWVYPQAMARGAASIMAATPVMAAEPPPTKSTINRIAIQSQNWYQGHGSLDRQSQVGWKPEKNLKFLLQKVLKQSDVGSLGRIVLPKKEAETHLPELEARDGISIEMEDIATSHMWNMRYRYWPNNKSRMYVLENTGDFVRANGLQEGDFIVIYSDVKCDKFCVLNNCESAGNLKAKKEMKDEIEFDVLKVLEKK*	663

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Dod07g1276	662	SMART	B3_2	535	638	IPR003340	GO:0003677
Dod07g1276	662	CDD	BfiI_C_EcoRII_N_B3	533	629	-	-
Dod07g1276	662	Gene3D	-	526	644	IPR015300	-
Dod07g1276	662	MobiDBLite	consensus disorder prediction	41	92	-	-
Dod07g1276	662	Pfam	B3 DNA binding domain	536	628	IPR003340	GO:0003677
Dod07g1276	662	PANTHER	B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3	18	637	-	-
Dod07g1276	662	MobiDBLite	consensus disorder prediction	161	199	-	-
Dod07g1276	662	MobiDBLite	consensus disorder prediction	161	188	-	-
Dod07g1276	662	ProSiteProfiles	B3 DNA-binding domain profile.	535	637	IPR003340	GO:0003677
Dod07g1276	662	MobiDBLite	consensus disorder prediction	54	74	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod07g1276	Dod-Chr7	34111836	34117975	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod07g1276	15	631	B3 DNA Binding Superfamily	AT3G24650	39.640	7.52e-107	338

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	B3	Dod07g1276		B3	2.4e-16	CL0405

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod07g1276	-		-	gmx:100795226	510.375

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