Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1267 ATGGAAATGAGGAACTGGGGTGCAGCGAAAGTATTTTCCTACAAAGAGATCAAATTGGCTACAAGAAACTTTAAAGAAGTTATAGGAAGGGGCAGTTTTGGATCTGTTTACCTTGGAAAGCTCCCAGATGGAAAATCAGTAGCTGTCAAAGTTCGGTCTGACAAATCCCAACTGGGAGCTGATTCTTTTATCAATGAGGTTAATATTTTGTCAAACATCCGGCATCAAAATCTTGTGTCTTTGGAAGGATTTTGTCATGAATCAAACCATCAGATACTACTTTATGAGTACTTGCCTGGTGGATCCCTGGTTGATCACCTCTATGGTACAAAAAGTAAAAAAACTTCCTTAAGTTGGGTCCGAAGGTTGAAAATTGCTGTTGATGCAGCCAAAGGATTGGATTATTTGCACAATGGAAGTGAACCGCGAATCATACACCGTGATGTCAAGTGCAGTAACATCCTCTTGGACGTGGACATGAATGCCAAGGTCTGTGACTTAGGCCTCTCTAAGCAAGTAACCCATGCTGATGCAACTCATGTCAGCACTGTTGTAAAGGGCACTGCTGGGTATCTTGATCCAGAGTATTATTCCACTCAACAGCTGACCGAGAAAAGTGATGTATATAGCTTTGGAGTGGTTCTTTTGGAACTTATTTGTGGAAGAGAACCATTGACTCACTCTGGGAATCCTGACTCATTCAATTTGGTGTTATGGGCCAAGCCATACTTACAGGCAGGTGCATTTGATATTGTGGATGAAGACATCAGAGGAACTTTTGATCCATTAAGCATGAGGAAGGCAGCTTTGATCGCTGTGAAGTCAGTGGAGAGGGATGCATCACAGAGGCCATCTATTGCAGAAGTGTTGGCTGAACTAAAGGAAGCCTATAGTATTCAGCTTAGATTCCTTCAATCTTGCCAAAATGATAATTGA 936 0.4188 MEMRNWGAAKVFSYKEIKLATRNFKEVIGRGSFGSVYLGKLPDGKSVAVKVRSDKSQLGADSFINEVNILSNIRHQNLVSLEGFCHESNHQILLYEYLPGGSLVDHLYGTKSKKTSLSWVRRLKIAVDAAKGLDYLHNGSEPRIIHRDVKCSNILLDVDMNAKVCDLGLSKQVTHADATHVSTVVKGTAGYLDPEYYSTQQLTEKSDVYSFGVVLLELICGREPLTHSGNPDSFNLVLWAKPYLQAGAFDIVDEDIRGTFDPLSMRKAALIAVKSVERDASQRPSIAEVLAELKEAYSIQLRFLQSCQNDN* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1267 311 ProSiteProfiles Protein kinase domain profile. 22 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1267 311 CDD STKc_IRAK 28 295 - -
Dod07g1267 311 Pfam Protein tyrosine and serine/threonine kinase 24 290 IPR001245 GO:0004672|GO:0006468
Dod07g1267 311 ProSitePatterns Protein kinases ATP-binding region signature. 28 50 IPR017441 GO:0005524
Dod07g1267 311 Gene3D Transferase(Phosphotransferase) domain 1 98 308 - -
Dod07g1267 311 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 3 306 - -
Dod07g1267 311 SUPERFAMILY Protein kinase-like (PK-like) 8 293 IPR011009 -
Dod07g1267 311 Gene3D Phosphorylase Kinase; domain 1 2 97 - -
Dod07g1267 311 SMART serkin_6 22 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1267 311 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Dod07g1267 311 PANTHER OS07G0107800 PROTEIN-RELATED 3 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1267 Dod-Chr7 33966295 33970639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1267 1 304 Receptor kinase-like Gene Family AT5G48740 78.289 9.66e-174 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Dod07g1267 PK_Tyr_Ser-Thr 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1267 - - aprc:113850446 582.022