Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1255 ATGGAAGGCCGCCGGAGGATAACGCTTTACGATCAAATGACAGCTGGCAACAGCACTTCACTAGCCGACCTTATACTAAACGACAATGTCGTTTTAACCGATCAGAACAGCGACGATACCGCCGCCGCCGGAGGAAGCTGCCAGCTCGGCCAGAGCCGAACACTCATAGACATCCTCCACGAAGATGAACGACACGACAACAACAACAACGAAACGACGTCGGATCGAAAATCTCGGAAAGCGTTGAACTTCATGGACAAGCTTAGGCTCAAGCTCACGCTCAATCCAAAGCCAAATTACAATAGTAACAACAACAACAACAACAACAATGATAACAATTACGAGTTGTCTCAGCAAGGCAATACTCACCAGCAACAAAACGACGACGTCGTTTCCGCAGAGCCGGAAATCGCGGCGGAGGTTTCGGAAGTTTCGGTTGCGGGACCAGTGGGCGTTTCGCTGATGGATTTGTTGGAAGAAACGGATGTGGAGACGGGGTTCGAGGTTTCGAGTTATAGAATGAGCGATGCTGATTGTGAAGAAGGTGTGAATGAATGTGAAGGAGAAGAGATCGGTGAGAAGGAAGAAGAGGAAGGAGCGGTTGTGGTGGAGCGTAACTGCTGCGTGTGTATGGTGAGGCATAAAGGTGCGGCGTTTATACCGTGCGGGCACACGTTCTGCAGGGCGTGCTCCAGGGAGGTTTGGGTTAGCAGAGGGAACTGCCCTCTCTGCAACAATTTCATTTTGGAAATTCTTGATATTTTCTGA 768 0.4987 MEGRRRITLYDQMTAGNSTSLADLILNDNVVLTDQNSDDTAAAGGSCQLGQSRTLIDILHEDERHDNNNNETTSDRKSRKALNFMDKLRLKLTLNPKPNYNSNNNNNNNNDNNYELSQQGNTHQQQNDDVVSAEPEIAAEVSEVSVAGPVGVSLMDLLEETDVETGFEVSSYRMSDADCEEGVNECEGEEIGEKEEEEGAVVVERNCCVCMVRHKGAAFIPCGHTFCRACSREVWVSRGNCPLCNNFILEILDIF* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1255 255 PANTHER OS01G0917900 PROTEIN 1 105 - -
Dod07g1255 255 SUPERFAMILY RING/U-box 206 251 - -
Dod07g1255 255 PANTHER OS01G0917900 PROTEIN 108 255 - -
Dod07g1255 255 MobiDBLite consensus disorder prediction 95 131 - -
Dod07g1255 255 ProSiteProfiles Zinc finger RING-type profile. 207 245 IPR001841 -
Dod07g1255 255 Pfam Zinc finger, C3HC4 type (RING finger) 204 248 - -
Dod07g1255 255 MobiDBLite consensus disorder prediction 93 131 - -
Dod07g1255 255 SMART ring_2 207 244 IPR001841 -
Dod07g1255 255 PANTHER OS01G0917900 PROTEIN 1 105 - -
Dod07g1255 255 CDD RING-HC 207 244 - -
Dod07g1255 255 PANTHER OS01G0917900 PROTEIN 108 255 - -
Dod07g1255 255 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 190 255 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1255 Dod-Chr7 33082768 33084298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1255 4 255 C3H Transcription Factor Family AT3G25030 34.432 4.83e-40 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1255 - - gmx:100802736 198.364