Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod07g1255 | ATGGAAGGCCGCCGGAGGATAACGCTTTACGATCAAATGACAGCTGGCAACAGCACTTCACTAGCCGACCTTATACTAAACGACAATGTCGTTTTAACCGATCAGAACAGCGACGATACCGCCGCCGCCGGAGGAAGCTGCCAGCTCGGCCAGAGCCGAACACTCATAGACATCCTCCACGAAGATGAACGACACGACAACAACAACAACGAAACGACGTCGGATCGAAAATCTCGGAAAGCGTTGAACTTCATGGACAAGCTTAGGCTCAAGCTCACGCTCAATCCAAAGCCAAATTACAATAGTAACAACAACAACAACAACAACAATGATAACAATTACGAGTTGTCTCAGCAAGGCAATACTCACCAGCAACAAAACGACGACGTCGTTTCCGCAGAGCCGGAAATCGCGGCGGAGGTTTCGGAAGTTTCGGTTGCGGGACCAGTGGGCGTTTCGCTGATGGATTTGTTGGAAGAAACGGATGTGGAGACGGGGTTCGAGGTTTCGAGTTATAGAATGAGCGATGCTGATTGTGAAGAAGGTGTGAATGAATGTGAAGGAGAAGAGATCGGTGAGAAGGAAGAAGAGGAAGGAGCGGTTGTGGTGGAGCGTAACTGCTGCGTGTGTATGGTGAGGCATAAAGGTGCGGCGTTTATACCGTGCGGGCACACGTTCTGCAGGGCGTGCTCCAGGGAGGTTTGGGTTAGCAGAGGGAACTGCCCTCTCTGCAACAATTTCATTTTGGAAATTCTTGATATTTTCTGA | 768 | 0.4987 | MEGRRRITLYDQMTAGNSTSLADLILNDNVVLTDQNSDDTAAAGGSCQLGQSRTLIDILHEDERHDNNNNETTSDRKSRKALNFMDKLRLKLTLNPKPNYNSNNNNNNNNDNNYELSQQGNTHQQQNDDVVSAEPEIAAEVSEVSVAGPVGVSLMDLLEETDVETGFEVSSYRMSDADCEEGVNECEGEEIGEKEEEEGAVVVERNCCVCMVRHKGAAFIPCGHTFCRACSREVWVSRGNCPLCNNFILEILDIF* | 256 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod07g1255 | 255 | PANTHER | OS01G0917900 PROTEIN | 1 | 105 | - | - | |
Dod07g1255 | 255 | SUPERFAMILY | RING/U-box | 206 | 251 | - | - | |
Dod07g1255 | 255 | PANTHER | OS01G0917900 PROTEIN | 108 | 255 | - | - | |
Dod07g1255 | 255 | MobiDBLite | consensus disorder prediction | 95 | 131 | - | - | |
Dod07g1255 | 255 | ProSiteProfiles | Zinc finger RING-type profile. | 207 | 245 | IPR001841 | - | |
Dod07g1255 | 255 | Pfam | Zinc finger, C3HC4 type (RING finger) | 204 | 248 | - | - | |
Dod07g1255 | 255 | MobiDBLite | consensus disorder prediction | 93 | 131 | - | - | |
Dod07g1255 | 255 | SMART | ring_2 | 207 | 244 | IPR001841 | - | |
Dod07g1255 | 255 | PANTHER | OS01G0917900 PROTEIN | 1 | 105 | - | - | |
Dod07g1255 | 255 | CDD | RING-HC | 207 | 244 | - | - | |
Dod07g1255 | 255 | PANTHER | OS01G0917900 PROTEIN | 108 | 255 | - | - | |
Dod07g1255 | 255 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 190 | 255 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod07g1255 | Dod-Chr7 | 33082768 | 33084298 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod07g1255 | 4 | 255 | C3H Transcription Factor Family | AT3G25030 | 34.432 | 4.83e-40 | 137 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod07g1255 | - | - | gmx:100802736 | 198.364 |