Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1245 ATGGGGTTTTCTAGAGCTATTAGAGATGCAGCAGAACAACAACAAGGGCAAGAGGCAAAGCCTTTAGTTTCCTCTCTGACCATGGCTTCAAATAGTAGTGTTAAGAGCACCAACTCAACAACAAATCAACTTGAACAACTCCTACCTTCTCCACATCTTCATCACCATCTTCACCCTTATCATCATCACCAACCACAGCATCATCAAATACAAGACCACCAAATTTCCTTTGGAATGATGCCATCTTCTTCATCATCATCTATCCCCGGAAACTACCTAAGCAAAGATTCCGGGGCTTATGATTTGGGTGAATTGGATCAAGCCTTTTTTATGTATCTTGATGGACAGGCTGACCCTTCCAGTGGCCAAGAACAAAGACAGAACTCACCGTCAGGAATGAGGCCACCAACTCTCAACATTTTCCCATCTCAGCCTATGCACGTAGAGCCCCCACCATCCAATTCCAAGGCCACAATGGAGTTGCCTTCTCCAGAAAATAATGGTTCCAAGAGGGCATCAGAGCCGTCCATGGAGTTGGCCAACCCACGAAATGATGCCGGTTCTGCTCCTGAACCACCCAAAGCTGTAAAGCGAGAGAGCAACCGCAAGGGTACAACGTCAAGTTCTGAACAAGAAGGGCCCAAAACACCAGATCCTAAGACTCTCAGAAGACTTGCTCAGAATAGAGAGGCAGCAAGGAAAAGCAGGCTCAGGAAAAAGGCGTACGTTCAGCAGCTAGAGTCCAGTAGGATCAAGCTCAATCAGCTGGAACAAGAATTACAGCGTGCTAGAGCTCAAGGCATATTCATGGGTGGAAATGCACTTTTGGGAGGGGAGCAAGGCCTTCCTGTTGCCATGAGCACCACCAGCTCAGAGGCTGCAATGTTTGATGTGGAATATGCGAGGTGGTTAGAGGAGCACCACCGCCTTGTGTGTGAGCTGAGAGCAGCAGTGCAGGAGCACCTTCATGAAAACGAGCTAAGGCTGTTTGTGGACAATTGCTTGGCTCATTATGACCAAGTGTTTTACGTCAAGAGCTTAGTGGCCAAAACAGACGTATTTCACCTTGTTTCTGGCATGTGGAAGACCCCAGCTGAACGTTGCTTCATGTGGATCGGTGGGTTCAGGCCATCTGAACTCATTAAGATTATTATGGGTCAAATTGAGCCTCTAACGGAGCAACAAATATTGGGGATATGTGGGTTGCAACAATCCACACATGAGTCAGAAGAGGCTCTCTCCCAAGGGCTTGAAGCCCTCAACCAATCTCTCTCAGACACTATAGCATCTGACTGTTTGAGCTCTGCACCCAATATGGTTAACTACATGGGACAGATGGCCGTGGCCATGAGCAAGCTCTCCTCTCTTGAAGGTTTCGTCAGACAGGCAGATAATCTGAGGCACCAGACCCTTCACCGTCTGCATCAGCTGCTAACAACACGCCAAGCGGCAAGGTGTTTGCTGGCCATAGCTGAGTACTTCCATCGCTTGCGAGCCCTCAGTTCTCTGTGGATGTCGCGCCCTCGCCAAGAATAG 1536 0.4857 MGFSRAIRDAAEQQQGQEAKPLVSSLTMASNSSVKSTNSTTNQLEQLLPSPHLHHHLHPYHHHQPQHHQIQDHQISFGMMPSSSSSSIPGNYLSKDSGAYDLGELDQAFFMYLDGQADPSSGQEQRQNSPSGMRPPTLNIFPSQPMHVEPPPSNSKATMELPSPENNGSKRASEPSMELANPRNDAGSAPEPPKAVKRESNRKGTTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLNQLEQELQRARAQGIFMGGNALLGGEQGLPVAMSTTSSEAAMFDVEYARWLEEHHRLVCELRAAVQEHLHENELRLFVDNCLAHYDQVFYVKSLVAKTDVFHLVSGMWKTPAERCFMWIGGFRPSELIKIIMGQIEPLTEQQILGICGLQQSTHESEEALSQGLEALNQSLSDTIASDCLSSAPNMVNYMGQMAVAMSKLSSLEGFVRQADNLRHQTLHRLHQLLTTRQAARCLLAIAEYFHRLRALSSLWMSRPRQE* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1245 511 SMART brlzneu 216 282 IPR004827 GO:0003700|GO:0006355
Dod07g1245 511 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 218 262 IPR004827 GO:0003700|GO:0006355
Dod07g1245 511 Pfam Seed dormancy control 311 385 IPR025422 GO:0006351|GO:0043565
Dod07g1245 511 MobiDBLite consensus disorder prediction 118 138 - -
Dod07g1245 511 SUPERFAMILY Leucine zipper domain 220 262 IPR046347 GO:0003700|GO:0006355
Dod07g1245 511 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 223 238 IPR004827 GO:0003700|GO:0006355
Dod07g1245 511 ProSiteProfiles DOG1 domain profile. 293 507 IPR025422 GO:0006351|GO:0043565
Dod07g1245 511 Gene3D - 219 268 - -
Dod07g1245 511 Pfam bZIP transcription factor 220 258 IPR004827 GO:0003700|GO:0006355
Dod07g1245 511 Coils Coil 239 266 - -
Dod07g1245 511 PANTHER TRANSCRIPTION FACTOR TGA9 103 510 - -
Dod07g1245 511 MobiDBLite consensus disorder prediction 1 22 - -
Dod07g1245 511 MobiDBLite consensus disorder prediction 115 223 - -
Dod07g1245 511 CDD bZIP_HBP1b-like 220 272 - -
Dod07g1245 511 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 103 510 - -
Dod07g1245 511 MobiDBLite consensus disorder prediction 156 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1245 Dod-Chr7 32627305 32641024 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1245 90 511 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 64.108 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod07g1245 DOG1 1.4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1245 K14431 - gmx:100815176 748.043