Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1231 ATGGCTAATTTGCATTCAACCTCAAGCAAAAACAAGTATTCTTTCAAGCCCACAGATGAAGAACTCATACTAAATTTTCTCTGCAGAAAAGTCGATGGGAGGCCTCTGCCGAATCATGCCACAATTCTTGAATGTGACTTGTACGGTGAAAAGAACCCTTGGGAGATTTGGGAAGCGTTTGGAGAGTCCAACTCATACGACGGAAGGGACCTCTACTTCTTCACCACACTGAAGAAGAAGTTCCTCACTAGCTCCCGCTCGGTTCGCACCATTGGGTTGGGTTCTTGGGAAGGTGAAGATGTTGGAAGGGTGGTCATGGCCAAGGGAACGAATCGGCGCATTGGGTTGAAGAAACGTTTTCGCTTTGAGAAGAGTGGCACCAGCCATGATGGTGCGTGGATCCTGCATGAATATAGCCTTGACTCCTCCTCGATTGCCACTCCATCAGAGAATAAATATGTTTTATGCAGATTCAGAAAGAATACAAGACATAATCCTCAACAAGAAACAAGTGTTAAAACAACTCGTCAACAAGAAGAGGATAGAGTTACTATAAAAAAGAGGGTCCTTGTTCTTGGACTTGAGGCTACTAACGAAACTGCCAAAAATGATGTTGGGATGGGAGAAGACAGTCACAAAGTATCAAGAAATCAACCAGGGAACGGAGATAAGACCATTGAGGATGTTGAAAGTAGTAGAATTGAGCCCAATTATGAGGAACGACAAGGTGGTGATCTCGATGTGTCATGGACAGAGGAGTTTGCATTGCAATTGAGGGAAATTAATGAAGACCTCTTGATCCAAGAGGAAGATATCCCCATGATCCCCAATACATTTTACAAGGATATCTTGTGGGAGAAGATTGATAATTTGTAG 876 0.4338 MANLHSTSSKNKYSFKPTDEELILNFLCRKVDGRPLPNHATILECDLYGEKNPWEIWEAFGESNSYDGRDLYFFTTLKKKFLTSSRSVRTIGLGSWEGEDVGRVVMAKGTNRRIGLKKRFRFEKSGTSHDGAWILHEYSLDSSSIATPSENKYVLCRFRKNTRHNPQQETSVKTTRQQEEDRVTIKKRVLVLGLEATNETAKNDVGMGEDSHKVSRNQPGNGDKTIEDVESSRIEPNYEERQGGDLDVSWTEEFALQLREINEDLLIQEEDIPMIPNTFYKDILWEKIDNL* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1231 291 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 14 249 - -
Dod07g1231 291 MobiDBLite consensus disorder prediction 202 226 - -
Dod07g1231 291 Gene3D NAC domain 18 166 IPR036093 GO:0003677|GO:0006355
Dod07g1231 291 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 14 249 - -
Dod07g1231 291 Pfam No apical meristem (NAM) protein 12 140 IPR003441 GO:0003677|GO:0006355
Dod07g1231 291 SUPERFAMILY NAC domain 13 159 IPR036093 GO:0003677|GO:0006355
Dod07g1231 291 ProSiteProfiles NAC domain profile. 9 161 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1231 Dod-Chr7 32244856 32248232 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1231 13 179 NAC Transcription Factor Family AT4G27410 33.871 3.89e-19 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod07g1231 NAM 2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1231 - - aprc:113871407 310.071