Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1209 ATGGAGCACACCGCACTGGAATCCATCCAATTCAACGAAGAAATCCAGGGGCTCATGGCACCGGCGCCGGAATCCACCGCCAGCTCCTTCACGGCGCTGCTCGAGCTCCCGCCGCCGCAGGCCGTCGAGCTCCTCCACTCGCCGGAGCGCTTTCCCGCTGAAAAACCTCCCTGCCACGTCAGCAACCCCAAACCCTACCCGTTGTTGAGCTCCTTCGGCGGCGGCGGCGGCGGCGGCAGCAACCTGACCTTCCCTTCCAACGCCGTGCTGATCGAGCGCGCCGCGAGGTTCTCCGTGTTTGCCGGCCAGGGACCGCTGCTGCCGGCGGAGGTGAAGAACGAGCCGCCGGAGAGTGATTCCAACCCGAGTTCGACTCAGTGCGGCGGCTGCGTCTCCGATCCCGCGGTGGAGAACAAGGGCGTGAAGAGGAAGGAGCGAGAGAAGAAGGTTAAAGCGTCGTCTAAGAAGAGCAAGAGCGTTACCTCCGGCGATTTCTCCGGCGACGGCGAGAAGCTTCCGTACGTTCACGTTCGAGTTCGTCGAGGTCAAGCCACTGATAGCCATAGCTTAGCAGAAAGGGCTAGGAGAGAGAAGATAAATGCTCGGATGAAGCTTTTGCAAGAGCTGGTCCCTGGTTGCAACAAGATATCAGGAACGGCATTGGTTCTGGATGAAATCATCAACCATGTGCAGTCTCTACAGCATCAAGTGGAGATTTTATCAATGAAATTGGCAGCAATTGACCCAAGAATTGATTTCAGCCTTGACAGCATATTGGCTAATGATGGGGCATCTCTAATGGACAGTAACTTCCCTAGCATGGGTTCACCTGTCATGTGGCCAGAAATCCCAAACCATGGAAATAGAGAGCAGTATCAGCAACCATGGCAATTTGATGCATCCCACCACCAACCACTTTGGGGGAGGGAAGAAGACAACCCTAATTTCATGACTCCAGAAAACTCACTTTTGAGTTATGACTCATCGGCTAATTCAGTATCTCTGCACTCAAATCAGTTGAAGATGGAGCTTTGA 1035 0.5469 MEHTALESIQFNEEIQGLMAPAPESTASSFTALLELPPPQAVELLHSPERFPAEKPPCHVSNPKPYPLLSSFGGGGGGGSNLTFPSNAVLIERAARFSVFAGQGPLLPAEVKNEPPESDSNPSSTQCGGCVSDPAVENKGVKRKEREKKVKASSKKSKSVTSGDFSGDGEKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQHQVEILSMKLAAIDPRIDFSLDSILANDGASLMDSNFPSMGSPVMWPEIPNHGNREQYQQPWQFDASHHQPLWGREEDNPNFMTPENSLLSYDSSANSVSLHSNQLKMEL* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1209 344 MobiDBLite consensus disorder prediction 108 167 - -
Dod07g1209 344 Pfam Helix-loop-helix DNA-binding domain 187 234 IPR011598 GO:0046983
Dod07g1209 344 MobiDBLite consensus disorder prediction 116 131 - -
Dod07g1209 344 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 344 - -
Dod07g1209 344 Gene3D - 180 252 IPR036638 GO:0046983
Dod07g1209 344 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 183 233 IPR011598 GO:0046983
Dod07g1209 344 SMART finulus 189 239 IPR011598 GO:0046983
Dod07g1209 344 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 344 IPR024097 GO:0006355
Dod07g1209 344 CDD bHLH_AtBPE_like 173 258 - -
Dod07g1209 344 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 181 252 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1209 Dod-Chr7 31588471 31594742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1209 2 344 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 49.610 7.44e-93 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod07g1209 HLH 1.3e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1209 - - aprc:113872810 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1209 07 31588471 31594742 Dod07g1209 07 31588471 31594742 ECH
Dod01g2285 01 60770826 60777177 Dod07g1209 07 31588471 31594742 PCT