Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1205 ATGCTCTTCAAGCTAGGGGAAGAAGAAAGAGTTGCAAATCAGGATCTGCTTCTTCAGTGCTTTCACTGTCTTCTTCTAGAACTTTCCATGGAGAATGACAAGATGGAAGACTATGAAGTAATACAGCAACTTGGAAGAGGAACACTGGGTGCAACTTTTCTGGTCCTCCACAAGACTGAGAGACAAAGGTATGTGTTGAAGAAGATTCGCTTGGCTAAGCAAACAGATAAGTCCCAGCCAACAGCACACCAAGAGATGAGCCTGATTGCAAAACTGAATAACCCTTATATTGTGGAGTGCAAAGATGCTTGGGTGGAAAAGGAGGACTATATGTGCATTATAACCAGCTATTGTGAAGGAGGTGACATGGCTCAGTATATAAAGAAAGCTCGAGGATCATTCATTGCTGAGGAGAAAATTTGCAAATGGATGACTCAGTTGTTGCTAGCTGTGGACTACCTGCACTCTAATCGTGTACTCCACAGAGATCTAAAGTGTTCCAACATATTACTCACCAAAGACAATAACATTCGGCTAGGTGACTTTGGTCTTGCAAAGCTACTTAATCCAGAAGACCTTCCTTCACCGGTTGTTGGAACTCCAAACTACATGTGCCCTGAGCTCCTTGATAAGACACCTTATGGTTATAAATCTGATATATGGGCCCTTGGCTGCTGTATGTTTGAAATTGCTGCACATCAACCAGCCTTTCGTGCACCAGACATGGCTGGACTAATCAATAAAATAAATAGATCCTCCATTTCTCCACTGCCAATTGTATACTCTCCGACACTGAAACAACTTATCAAAAGCATGCTGAGGAAAAATCCAGAACATCGACCGACAGCGGCCGACTTGTTAAGGCACCCTCATTTACAACCTTATGTTCTCCGCTGTCGTAATGCATCAAAAACTGTTTTTCTTCCGGTACATCTCATAAGTAGTAACTCAAAAGATAAAACGAAAAGATCTTACAAATCTAGTGGTGGCAAAGATAACAGAGACAAAGAAGAAGGATTAGTAAATCATATGGAGCGGGTTCATCCAGTTGAGGGAAATGGAGATATGCATGTAAGCAATCATTCTAATGATGGCAGGCTAACAGTCTCAAGCAGTGCAGAAGACAACCTTGAGACCAAGATGGTTGATCCTACCAGCTACAAAATGGAAACTTCAACTAGTATTAGTGGCTCAAAAGATGGGCCAACAACATCTGAATCAACCATTTGCTGTGTGTGCAAGGAAGCAGACTTTAAAAGTAGACTTGCAAAGGAAACAGCTGACAGTGAGATCACATCAAAGAGTACACCAGATTCTCTGCTTGAAGGGCAAGGAGTTGCTGCTGAACAATTTCTGCAGTCAGATGTGATTAACACAACCACAACGGCCACAGAAGTCGAAGACCCCCTTTCCAATGAAGGTTTTGATAAAGCCGACATGCAGAGGGAAGATGCCAAACCTGAGGACTCTTGTAAATCAATAATGTCCAGTGAAGACGGCTCCAGCAACGACAAAGATGCGTTTGTTGACGAAGAAAGGTTGTCATCATCACCAGTTGTGCATCCTGTCACCGCTGAACATGACAACACTGAATCTGAAAGCTGCTTGAAGAAAACTGAAAACCACGACGCAAGTATAGAATCCTCTCACATGGACTGCTTGTCACATGTGAGTAATGATACACGTCCGGGTAAGGATGAAAGCAGTGCAAACACACACATCATCGACTGTTCCACACATAAAGAAGTAAAAAATGCTGTGGTTGTTGATAAGACCCCAAATGGCATTTCATTAAGCACTTCAAAAGGTGGTGATGAGACAAAGAGTGTGTTGATCAAGAGCAGCCAGCATAGAGCTGATGCTCTGGAAGCTCTGCTTGAGTTGTGTGCTCAGCTACTTAAGCAAGGGAAACATGAAGAGTTGGCTGCTGTGCTAAGACCATTTGGAGGAGACACAGTCTCATCCAGAGAAACAGCAATATGGCTGACAAAAAGCCTACTTTCCTCACAAAAATTCAATCCCGAAACATAG 2031 0.4289 MLFKLGEEERVANQDLLLQCFHCLLLELSMENDKMEDYEVIQQLGRGTLGATFLVLHKTERQRYVLKKIRLAKQTDKSQPTAHQEMSLIAKLNNPYIVECKDAWVEKEDYMCIITSYCEGGDMAQYIKKARGSFIAEEKICKWMTQLLLAVDYLHSNRVLHRDLKCSNILLTKDNNIRLGDFGLAKLLNPEDLPSPVVGTPNYMCPELLDKTPYGYKSDIWALGCCMFEIAAHQPAFRAPDMAGLINKINRSSISPLPIVYSPTLKQLIKSMLRKNPEHRPTAADLLRHPHLQPYVLRCRNASKTVFLPVHLISSNSKDKTKRSYKSSGGKDNRDKEEGLVNHMERVHPVEGNGDMHVSNHSNDGRLTVSSSAEDNLETKMVDPTSYKMETSTSISGSKDGPTTSESTICCVCKEADFKSRLAKETADSEITSKSTPDSLLEGQGVAAEQFLQSDVINTTTTATEVEDPLSNEGFDKADMQREDAKPEDSCKSIMSSEDGSSNDKDAFVDEERLSSSPVVHPVTAEHDNTESESCLKKTENHDASIESSHMDCLSHVSNDTRPGKDESSANTHIIDCSTHKEVKNAVVVDKTPNGISLSTSKGGDETKSVLIKSSQHRADALEALLELCAQLLKQGKHEELAAVLRPFGGDTVSSRETAIWLTKSLLSSQKFNPET* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1205 676 Pfam Protein kinase domain 38 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1205 676 MobiDBLite consensus disorder prediction 526 549 - -
Dod07g1205 676 MobiDBLite consensus disorder prediction 318 352 - -
Dod07g1205 676 MobiDBLite consensus disorder prediction 356 378 - -
Dod07g1205 676 Gene3D Transferase(Phosphotransferase) domain 1 120 351 - -
Dod07g1205 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Dod07g1205 676 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 32 511 - -
Dod07g1205 676 Gene3D Phosphorylase Kinase; domain 1 24 117 - -
Dod07g1205 676 CDD STKc_Nek 37 292 - -
Dod07g1205 676 MobiDBLite consensus disorder prediction 318 378 - -
Dod07g1205 676 SMART serkin_6 38 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1205 676 MobiDBLite consensus disorder prediction 462 549 - -
Dod07g1205 676 MobiDBLite consensus disorder prediction 470 493 - -
Dod07g1205 676 ProSiteProfiles Protein kinase domain profile. 38 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1205 676 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 515 658 - -
Dod07g1205 676 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 32 511 - -
Dod07g1205 676 SUPERFAMILY Protein kinase-like (PK-like) 35 320 IPR011009 -
Dod07g1205 676 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 515 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1205 Dod-Chr7 31483109 31490144 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1205 44 337 MAP Kinase Kinase Kinase AT1G53570 29.431 2.00e-32 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Dod07g1205 Pkinase 7.7e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1205 K08857 - gmx:100793379 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1205 07 31483109 31490144 Dod07g1205 07 31483109 31490144 ECH
Dod01g2279 01 60687215 60693253 Dod07g1205 07 31483109 31490144 PCT