Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1202 ATGGCAGACCCTTACTCTAATTTCTTCTCAGGTTTCTTCCATTTCAATACCTCCCATCTTGACCCTTCTTCAACCCCTTCTGGTTCCCACCATCCCTATCTCCACAACTTCATCAACAACGCTTCCAACAGTAACAGCTTTTTCCACTACCAGAACCATCAAACTACCACTATCACTTCTTCCTCTTCTTCTTCATCCTCTTCTTCACCGCCTTCCCCTCCTCTCAGAGAAGCCCTACCACTTTTAAGGCTCAGCCCGAAAAAGCAAGAAGAGGATGAAATTGAAGAGCTAGAACAAAGGACAAGAACAAGAGGATCGAAAAATAGCAAACCCAAAGAGGAAGAAGATGCTGAGGATGAGGACACCACTGTGACTGTTGCACTCCACATAGGGCTACCAAGCCCTAGTGCTGCTGAGATGGCCTCCATCTCCATGCTTTCCTCTTCTTTGAAGATCATAGAAGCTGACAAAGAAGAAGAAGAAGAACAACAACAACAGCAAGAAGAAGAGCAAGGAGATGGTAGTGAGGAGTACTCTCATGGGTTCCTGGCCACAAGACTCAACAAGGGACAGTACTGGATCCCTACGCCTTCTCAGATTCTCATTGGTCCTACACAGTTCTCTTGCCCTGTCTGCTGCAAAACCTTCAACAGATATAACAACATGCAGATGCATATGTGGGGGCATGGATCACAGTACAGAAAAGGGCCTGAATCTCTGAGAGGTACACAACCAACAGGTATGCTTAGGCTTCCTTGCTATTGCTGTGCACCAGATTGCAGGAACAACATTGACCACCCAAGAGCAAAGCCCCTCAAAGATTTCAGAACCCTTCAAACACATTACAAGAGGAAGCATGGGATTAAGCCCTTCATGTGCAGGAAATGCGGCAAGGCTTTTGCTGTGAGGGGAGACTGGAGAACCCATGAAAAGAACTGCGGGAAGCTTTGGTATTGCATCTGTGGCTCTGATTTCAAGCACAAGAGGTCGCTTAAAGATCACATAAGAGCCTTTGGGAGTGGCCATGGAGCTTACGGGGTCGATGGATTTGAAGAAGAAGAAGAGCCAGCATCCGAAGTAGAGCAAGATAATGATGAATTCACCCAGTAA 1110 0.4658 MADPYSNFFSGFFHFNTSHLDPSSTPSGSHHPYLHNFINNASNSNSFFHYQNHQTTTITSSSSSSSSSSPPSPPLREALPLLRLSPKKQEEDEIEELEQRTRTRGSKNSKPKEEEDAEDEDTTVTVALHIGLPSPSAAEMASISMLSSSLKIIEADKEEEEEQQQQQEEEQGDGSEEYSHGFLATRLNKGQYWIPTPSQILIGPTQFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPDCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIRAFGSGHGAYGVDGFEEEEEPASEVEQDNDEFTQ* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1202 369 MobiDBLite consensus disorder prediction 350 369 - -
Dod07g1202 369 MobiDBLite consensus disorder prediction 156 177 - -
Dod07g1202 369 Gene3D Classic Zinc Finger 206 229 - -
Dod07g1202 369 PANTHER ZINC FINGER PROTEIN WIP2-LIKE 21 366 - -
Dod07g1202 369 ProSitePatterns Zinc finger C2H2 type domain signature. 209 229 IPR013087 -
Dod07g1202 369 Gene3D Classic Zinc Finger 269 344 - -
Dod07g1202 369 MobiDBLite consensus disorder prediction 83 114 - -
Dod07g1202 369 MobiDBLite consensus disorder prediction 54 72 - -
Dod07g1202 369 Coils Coil 143 173 - -
Dod07g1202 369 SUPERFAMILY beta-beta-alpha zinc fingers 273 311 IPR036236 -
Dod07g1202 369 PANTHER ZINC FINGER PROTEIN WIP2 21 366 IPR043584 GO:0003700|GO:0010468
Dod07g1202 369 ProSiteProfiles Zinc finger C2H2 type domain profile. 291 311 IPR013087 -
Dod07g1202 369 SMART c2h2final6 207 229 IPR013087 -
Dod07g1202 369 SMART c2h2final6 291 311 IPR013087 -
Dod07g1202 369 MobiDBLite consensus disorder prediction 54 122 - -
Dod07g1202 369 ProSiteProfiles Zinc finger C2H2 type domain profile. 207 234 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1202 Dod-Chr7 31363013 31365589 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1202 1 365 C2H2 Transcription Factor Family AT3G57670 61.125 2.96e-151 430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod07g1202 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1202 - - gmx:100813583 486.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1202 07 31363013 31365589 Dod07g1202 07 31363013 31365589 ECH
Dod07g1202 07 31363013 31365589 Dod10g1780 10 38930193 38933026 ECH
Dod07g1202 07 31363013 31365589 Dod03g3000 03 62309558 62312117 ECH
Dod01g2277 01 60642953 60645969 Dod07g1202 07 31363013 31365589 PCT