Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1190 ATGCGGTGGTTACCACTCCAAAAGGCAGAAGCGGCATATAGCTTGGAGTCTTCTGGGGTTTCTGTGAGCGACGGAGGAGCTTTTAGTGAGGCTGTGGCGGCTAGGATTAAGGGAATGACTGCAATGACCGTTGATGATGGCATGGCAAAAGAGTGGTGCTTAACGAAGAGGATGGTCTTAGCTGATTTTAGATTTCAATACTTCAGTTCTTGTGATGCGGTGGCTGATTCTGAGGCACGAGGCAGCAGGGAAAAAGGGCATGAGAAGACGAGGCAATTGAAGAGAAGGAGAGATGTCAGGAACATAGCAATTGTTGCTCATGTTGATCATGGAAAAACAACTCTAGTTGATGCCATGCTGAAACAGACAAAGGTATTTCGTGATAATCAGTTTGTGCAGGAAAGAATAATGGACTCAAATGATTTGGAGCGTGAAAGAGGAATCACAATACTAAGTAAAAACACATCTGTCACCTATCATGACACAAAGATTAATATAATAGATACTCCAGGTCACTCTGATTTTGGAGGTGAAGTGGAGCGTATCCTAAATATGGTGGAAGGAATCCTTCTAGTGGTAGATTCTGTTGAAGGGCCAATGCCACAGACAAGATTTGTGTTAAAGAAAGCTTTAGAGTTTGGTCATGCAGTTGTTGTGGTTGTCAATAAGATAGACAGGCCTTCTGCACGCCCAGATTTTGTTGTCAATTCTACTTTTGAGCTCTTCATTGAATTGAATGCAACAGATGAACAGTGTGACTTTCAAGTAATATATGCAAGTGGTATAAAAGGGCAAGCAGGTTTGTCCCCTGAAAATTTGGCCGAAGACCTTGGGCCATTGTTTGAATCCATCATCAGATGCATCCCTGGACCACGAATTGATAAAGATGGCGCACTTCAAATGCTTGTCACAAATATTGAGTATGATGAACACAAAGGACGAATAGCAATTGGGCGTTTGCAAGCTGGAGTTTTAGAAAGAGGCATGGATGTCAAGGTATGTACATCAGAAGATTTGTGTCGATATGGAAGAATTAGCGAGCTTTACGTGTATGACAAATTCAGTAGGGTCCCTGCCGAAAGGGTGGAGGCTGGCGATATATGTGCCGTATGTGGAATTAGTGATATTCAGATTGGGGAGACGATTGCTGATAAAGTATTTGGGAAGCCACTACCTTCCATAAAGGTGGAGGAACCAACTGTGAAAATGGCTTTCTCCATAAACACTGCACCTTTTGTTGGCCGTGAGGGAAAGTATGTTACTAGTAGGAATTTAAGGGACAGGCTTTATCGCGAACTTGAACGCAATCTGGCTATGAGAGTAGAAGATGGTGAGACAGCTGATACATTCATTGTCAGTGGGCGTGGAACTTTGCATATCACCATACTAATAGAAAATATGCGAAGAGAAGGATATGAATTCATGGTTGGGCCTCCCAAAGTTATCAACAAGAAGGTGAATGATCAATTGCTGGAACCGTATGAGATTGCAACGGTGGAGGTACCTGAAGAACATATGGGAGCTGTTGTTGAGCTGCTTGGCAAAAGGCGAGGGCAAATGTTTGATATGCAAGGAGTTGGATCGGAGGGAACTACACTACTCAAATATAAGATCCCAACTCGTGGCCTTCTTGGATTACGGAATGCAATTTTAACTGCTTCCCGAGGGACAGCTATTCTCAACACTATCTTTGATAGCTATGGGCCCTGGGCTGGTGACATCAGTACTCGCGATCAAGGCTCGCTGGTTGCTTTTGAGGATGGAACAAGTACCTCTTATGCAATCTCTAGTTCGCAGGAGAGGGGACAGATGTTCATTAGTCCTGGAGTGGATGTTTATAAAGGTCAAATTGTTGGCATTCATCAGCGGCCTGGGGACTTGGCCTTGAATGTTTGCAAGAAGAAAGCTGCAACAAACATACGATCGAACAAGGAACAAACAGTGATTCTTGATACACCCTTGGATTATAGTCTGGATGACTGCATTGAATACATCCAAGAAGATGAACTAGTGGAGGTCACTCCCCTAAGTATTCGAATGTGCAAGAATCCTAAACTTCAGAAGAAAACAAGGTAG 2076 0.434 MRWLPLQKAEAAYSLESSGVSVSDGGAFSEAVAARIKGMTAMTVDDGMAKEWCLTKRMVLADFRFQYFSSCDAVADSEARGSREKGHEKTRQLKRRRDVRNIAIVAHVDHGKTTLVDAMLKQTKVFRDNQFVQERIMDSNDLERERGITILSKNTSVTYHDTKINIIDTPGHSDFGGEVERILNMVEGILLVVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARPDFVVNSTFELFIELNATDEQCDFQVIYASGIKGQAGLSPENLAEDLGPLFESIIRCIPGPRIDKDGALQMLVTNIEYDEHKGRIAIGRLQAGVLERGMDVKVCTSEDLCRYGRISELYVYDKFSRVPAERVEAGDICAVCGISDIQIGETIADKVFGKPLPSIKVEEPTVKMAFSINTAPFVGREGKYVTSRNLRDRLYRELERNLAMRVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPKVINKKVNDQLLEPYEIATVEVPEEHMGAVVELLGKRRGQMFDMQGVGSEGTTLLKYKIPTRGLLGLRNAILTASRGTAILNTIFDSYGPWAGDISTRDQGSLVAFEDGTSTSYAISSSQERGQMFISPGVDVYKGQIVGIHQRPGDLALNVCKKKAATNIRSNKEQTVILDTPLDYSLDDCIEYIQEDELVEVTPLSIRMCKNPKLQKKTR* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1190 691 Gene3D bipa protein 577 684 IPR042116 -
Dod07g1190 691 SUPERFAMILY EF-G C-terminal domain-like 492 607 IPR035647 -
Dod07g1190 691 Gene3D - 483 576 - -
Dod07g1190 691 Pfam Elongation factor Tu domain 2 313 382 IPR004161 GO:0005525
Dod07g1190 691 CDD TypA_BipA 98 291 - -
Dod07g1190 691 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 299 IPR027417 -
Dod07g1190 691 Pfam Elongation factor G C-terminus 489 575 IPR000640 -
Dod07g1190 691 CDD BipA_TypA_II 299 392 - -
Dod07g1190 691 Gene3D Elongation Factor G (Translational Gtpase), domain 3 400 683 - -
Dod07g1190 691 Pfam Elongation factor Tu GTP binding domain 98 289 IPR000795 GO:0003924|GO:0005525
Dod07g1190 691 SMART EFG_C_a 489 578 IPR000640 -
Dod07g1190 691 Gene3D Translation factors 293 393 - -
Dod07g1190 691 CDD BipA_TypA_C 492 571 IPR035651 -
Dod07g1190 691 SUPERFAMILY EF-G C-terminal domain-like 397 481 IPR035647 -
Dod07g1190 691 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 97 292 IPR000795 GO:0003924|GO:0005525
Dod07g1190 691 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 72 691 - -
Dod07g1190 691 PANTHER BNAC09G43450D PROTEIN 72 691 - -
Dod07g1190 691 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 138 153 IPR031157 -
Dod07g1190 691 Gene3D - 96 292 IPR027417 -
Dod07g1190 691 CDD BipA_III 399 477 - -
Dod07g1190 691 SUPERFAMILY Translation proteins 245 392 IPR009000 -
Dod07g1190 691 TIGRFAM small_GTP: small GTP-binding protein domain 100 248 IPR005225 GO:0005525
Dod07g1190 691 TIGRFAM TypA_BipA: GTP-binding protein TypA/BipA 99 688 IPR006298 GO:0005525
Dod07g1190 691 PRINTS GTP-binding elongation factor signature 101 114 IPR000795 GO:0003924|GO:0005525
Dod07g1190 691 PRINTS GTP-binding elongation factor signature 165 175 IPR000795 GO:0003924|GO:0005525
Dod07g1190 691 PRINTS GTP-binding elongation factor signature 145 153 IPR000795 GO:0003924|GO:0005525
Dod07g1190 691 PRINTS GTP-binding elongation factor signature 217 226 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1190 Dod-Chr7 30860025 30874977 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1190 97 226 Eukaryotic Initiation Factors Gene Family AT3G22980 43.939 1.44e-23 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1190 K06207 - gmx:100785222 1139.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1190 07 30860025 30874977 Dod07g1190 07 30860025 30874977 ECH