Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1188 ATGAACACAGTGGGTGTAGAACAAGACACAACAAATCCGAGGAACAAAACAATTGTGTTTCATTCTCCACTTCACTCACTGAAATCTCTGATGGTCGTTGATGCCTCCTCTCCACTGAACTCGAAACGGAGAAGGCTCACCAACATTTATTCCATGGCTAATCTTGCAGATATGAGTGAAAGGTTTGGCCGGAAGATTCGTGTTTTTGAAACCTCACCAGTTTCTCTGTCGCCAAATGCTGCAGCAAACAACGAAGGAGAGGAGACTGATGACTTCTATGAATTCACCCCAGAAGATTATTACCGACTTCTGGCTACTAAAAAGGAAGATAAATTCTTGAAGACTCGTAAAATTAGAGAAGCAGAAGAGGCAGCACGTAGGTCAAGAATAACCAAAGCCGTCATTCGGGTTCGCTTCCCTGATAATCACACATTGGAGGCTACCTTTCACCCATCAGAAACAATCCAGAGTTTAGCTGATCTTGTCACTAAAGTGATTGCCCAACCAGAGCAGCCATTTTATTTCTATACCACACCGCCCAAGAAGCTGATCAAAGACATGTCTCAGGACTTCTATACTGCTGGCTTTTGTCCTGGTGCTATTGTGTACTTTTCATATGATGTTCCAAAAGGTGATGGTGCTGTTGTTGGCCAAATTGGTCCTTACCTGCGCGAAGAGGTCATGTCCTTGAAGGATCTGGATGCATCTACTGACCAAGGTCAGCAATCACAGCCTGTGCAATCTGAACCACAGCTTGAAGTCGCAACACAATCTCCTCCTGTTGAAGAACGTAA 794 0.4433 MNTVGVEQDTTNPRNKTIVFHSPLHSLKSLMVVDASSPLNSKRRRLTNIYSMANLADMSERFGRKIRVFETSPVSLSPNAAANNEGEETDDFYEFTPEDYYRLLATKKEDKFLKTRKIREAEEAARRSRITKAVIRVRFPDNHTLEATFHPSETIQSLADLVTKVIAQPEQPFYFYTTPPKKLIKDMSQDFYTAGFCPGAIVYFSYDVPKGDGAVVGQIGPYLREEVMSLKDLDASTDQGQQSQPVQSEPQLEVATQSPPVEER 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1188 264 MobiDBLite consensus disorder prediction 230 264 - -
Dod07g1188 264 Gene3D - 122 204 - -
Dod07g1188 264 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1-RELATED 23 241 - -
Dod07g1188 264 MobiDBLite consensus disorder prediction 234 255 - -
Dod07g1188 264 Pfam UBX domain 131 198 IPR001012 GO:0005515
Dod07g1188 264 ProSiteProfiles UBX domain profile. 128 204 IPR001012 GO:0005515
Dod07g1188 264 SUPERFAMILY Ubiquitin-like 107 204 IPR029071 -
Dod07g1188 264 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 23 241 IPR044232 GO:0032984|GO:0051117
Dod07g1188 264 CDD UBX2_UBXN9 133 206 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1188 60 153 C2H2 Transcription Factor Family AT2G01650 34.694 6.94e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1188 K15627 - gmx:100792947 336.65