Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1180 ATGGGGCCAACAGTGGTGGCACAGGAAAATCAGGGACAGACATGTGAGTCTCTGAGCCAGCGTTTCACGGGAGCCTGTTTGAGTGCCACTAAATGTGCCTCTGTTTGCGAAACTGAGGGCTTCCCTTCGGGGGGGCATTGCCATCGCTTTTTACGCAGATGCTTCTGCAGGAAACCTTGTGATAAATCAACATAA 195 0.5128 MGPTVVAQENQGQTCESLSQRFTGACLSATKCASVCETEGFPSGGHCHRFLRRCFCRKPCDKST* 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1180 64 ProSitePatterns Gamma-thionins family signature. 13 36 IPR008176 GO:0006952
Dod07g1180 64 PRINTS Purothionin signature 45 59 IPR008176 GO:0006952
Dod07g1180 64 PRINTS Purothionin signature 14 29 IPR008176 GO:0006952
Dod07g1180 64 SUPERFAMILY Scorpion toxin-like 14 60 IPR036574 -
Dod07g1180 64 SMART gth_4 14 60 IPR003614 GO:0006952
Dod07g1180 64 Gene3D - 13 60 IPR036574 -
Dod07g1180 64 CDD Knot1 24 57 IPR003614 GO:0006952
Dod07g1180 64 PANTHER DEFENSIN-LIKE PROTEIN 1 2 60 - -
Dod07g1180 64 PANTHER CYSTEINE-RICH PROTEIN LCR69, PUTATIVE-RELATED 2 60 - -
Dod07g1180 64 Pfam Gamma-thionin family 13 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1180 Dod-Chr7 30293146 30293340 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1180 1 60 Plant Defensins Gene Families AT2G02100 53.333 1.51e-14 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1180 - - gsj:114420878 73.1738