Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1164 ATGTCCCTGGAAGAGTCTCTAAGATCTCTATCGCTTGACTACCTTAACCTCCTCATCAACGGCCAAGCCTTTAGCGACGTCACTTTCCAAGTGGAAGGCCGCCTTGTCCACGCGCACCGCTGCATCCTCGCGGCCCGCAGCCTCTTCTTCAGGAAGTTCTTCTGCGGGCCCGACCCTCCTGCGGGGCTTGACCCAGCTGGAGTCTCTCGGGCCAGTTCGAGCCCAGCGGGATCGACGCCGAGGCCCGGCGTCATCCCGGTGAACTCAGTTGGGTACGAGGTGTTCTTGCTGCTCCTGCAGTTCCTGTACAGCGGGCAAGTCTCCATCGTCCCGCAGAAGCACGAGGCGAGGCCCAATTGCGGCGAGAGAGGGTGCTGGCACACGCATTGCACCTCAGCCGTTGATCTGGCTCTTGATACCCTCGCTGCCGCTAGATACTTTGGCGTTGAACAGCTGGCATTGCTAACTCAGAAACAACTCGCCAGCATGGTAGAGAAAGCCTCAATCGAAGATGTAATGAAGGTGCTCCTAGCTTCGAGAAAACAAGAAATGCACCAGCTGTGGACAACGTGCTCCCACCTCGTGGCCAACTACACCATCATCACCACCACCACCACCACGATCCTCGCCGCCGCAGCAGGCGACATCGAGGACCAGAAAATCCGGCGAATGAGGAGGGCCCTCGACTCCTCAGACGTGGAGCTAGTGAAGCTCATGGTAATGGGTGAAGGCCTGAACCTCGACGAGGCCCTGGCCTTGCACTACGCCGTGGAGAATTGCAGCAGAGAGGTCGTTAAGGCCCTGCTGGAGCTCGGAGCGGCGGATGTTAACTTCCCTGCTGGTCCAGCCGGGAAGACACCGCTCCACGTGGCAGCTGAGATGGTGTCCCCAGACATGGTGGCGGTCCTGCTGGACCACCACGCGGATCCCAATGTCCGGACCGTTGACGGGGTCACCCCTCTCGACACCCTCAGAACCCTAACCTCTGATTTCCTCTTCAAAGGCGCTGTCCCTGGGCTAACCGACATTGAGCCGAACAAGCTCAGGCTGTGCCTGGAGCTTGTTCAGTCCGCGGCTCTTGTGATTTCACGAGAAGAAGGCATTGCTAATAATAGTAATAACAACCCTCCTTCCAGCACTGCTGCTGCCATATATCCTCCAACAATGAGCAGTGATCAAGACCATAGCGGGACCTTGGACTCCAGGTTGGTGTACCTCAACCTTGGTGCGACGGGCCAAATGGGTGGTGGTGATGATGATAGCAGCAGCAGCCATAATAGCCAAAGGGAAGCCATGAACCGTCATGGGTCGCAAGGGGGTGGGTGTGACCCGACAATGTACCACCACCACTCTCATGACTTCTAG 1365 0.5773 MSLEESLRSLSLDYLNLLINGQAFSDVTFQVEGRLVHAHRCILAARSLFFRKFFCGPDPPAGLDPAGVSRASSSPAGSTPRPGVIPVNSVGYEVFLLLLQFLYSGQVSIVPQKHEARPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQKQLASMVEKASIEDVMKVLLASRKQEMHQLWTTCSHLVANYTIITTTTTTILAAAAGDIEDQKIRRMRRALDSSDVELVKLMVMGEGLNLDEALALHYAVENCSREVVKALLELGAADVNFPAGPAGKTPLHVAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDTLRTLTSDFLFKGAVPGLTDIEPNKLRLCLELVQSAALVISREEGIANNSNNNPPSSTAAAIYPPTMSSDQDHSGTLDSRLVYLNLGATGQMGGGDDDSSSSHNSQREAMNRHGSQGGGCDPTMYHHHSHDF* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1164 454 Pfam BTB/POZ domain 16 113 IPR000210 GO:0005515
Dod07g1164 454 Gene3D Potassium Channel Kv1.1; Chain A 3 198 IPR011333 -
Dod07g1164 454 PANTHER REGULATORY PROTEIN NPR5 1 199 - -
Dod07g1164 454 PANTHER REGULATORY PROTEIN NPR5 211 451 - -
Dod07g1164 454 SMART BTB_4 25 164 IPR000210 GO:0005515
Dod07g1164 454 MobiDBLite consensus disorder prediction 416 434 - -
Dod07g1164 454 MobiDBLite consensus disorder prediction 410 444 - -
Dod07g1164 454 Pfam Ankyrin repeats (3 copies) 231 313 IPR002110 GO:0005515
Dod07g1164 454 Gene3D - 201 331 IPR036770 -
Dod07g1164 454 SMART ANK_2a 283 312 IPR002110 GO:0005515
Dod07g1164 454 SMART ANK_2a 248 278 IPR002110 GO:0005515
Dod07g1164 454 ProSiteProfiles Ankyrin repeat profile. 283 315 IPR002110 GO:0005515
Dod07g1164 454 CDD BTB_POZ_NPR_plant 8 164 - -
Dod07g1164 454 ProSiteProfiles Ankyrin repeat region circular profile. 283 313 - -
Dod07g1164 454 SUPERFAMILY POZ domain 9 162 IPR011333 -
Dod07g1164 454 ProSiteProfiles BTB domain profile. 25 111 IPR000210 GO:0005515
Dod07g1164 454 MobiDBLite consensus disorder prediction 368 397 - -
Dod07g1164 454 PANTHER BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 1 199 IPR044284 GO:0099402
Dod07g1164 454 PANTHER BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 211 451 IPR044284 GO:0099402
Dod07g1164 454 SUPERFAMILY Ankyrin repeat 242 325 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1164 Dod-Chr7 29210052 29214146 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Dod07g1164 BTB 6.2e-15 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1164 K14508 - gmx:100811388 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1164 07 29210052 29214146 Dod07g1164 07 29210052 29214146 ECH
Dod01g2175 01 58790227 58794378 Dod07g1164 07 29210052 29214146 PCT