Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1159 ATGGCCAGTAACAGCAACAACAACAACAATATGGACAGAGAGAGGGACCTTGAGTTTGTGTTTGATCAGAACGACGAGGACGCCAACGAAGGTGAACAGCAGGATATTGAAGCTGTCAAGTTCGAGAGTGAGAGCAGCAGTGAGAGTGGCAGTGATGATGATGAAGGGAGGAGCCATAGAGCACAGCCTGAGTCTTTCTCTTCTCAGCAGTGGCCTCAAAGTTACAAAGAGACTACGGATTCTTACACAATCGCTGCAGCACCGAATTTCGAGTCATTTATACGAGGGCCAAGCTTTCTCTATTCAAGTTTTGTGAATCGTTCAAAGAGCAGCTTGGAGATAGATGGAAAAATCCCTTTTCTGTCTGGTCGTGAAGGCAGCGTCACTCAATCAACATGGTGGGAGAAAGCTTCAATCCAAAGGCATGTTACAGGGGAATTGCCCATTGGTTATGGATGCAGCTTCACTCAAACAGTTTTCAATGGGCTTAATGTGATGGCTGGAGTTGGCCTTCTCTCTACACCATATACTGTGAATCAAGCTGGGTGGGCCAGCATGCTGGTGATGCTTTTTTTTGCAGTTGTATGTTGTTATACAGCCACCCTTTTGAGGTGCTGCTTTGAAAGCAGAGAAGGAATCATTAGCTACCCAGATATAGGAGAGGCTGCATTTGGAAGATATGGCCGTATTGTTGTATCAGTCATTTTGTACACTGAATTATATTCATATTGTGTGGAATTCATCATCCTGGAAGGAGATAACCTCACTAGTCTGTTTCCTGGAACATCATTCGATTTGAGGGGTCTCCATTTAGACTCTGTGCATTTGTTTGGAATTTTGACTGCACTTCTTATTCTTCCTACTGTTTGGTTGAAGGATCTTCGTATAATCTCTTATCTATCAGCTGGAGGGGTTGTTGCAACACTTTTGATCGTTATTTGTGTGTTTTGTGTTGGGACAATTGATGGTATTGGATTCCACCACACTGGTCAAGTTGTGAGATGGAGTGGCATTCCATTCGCTATTGGTATCTATGGATTTTGCTTTGCAGGGCATTCAGTCTTTCCTAATATTTACCAGTCCATGGCTGATAAAAGAGAATATACCAAGGCATTACTAACATGTTTTGTTTTGTGCATTTTGATATATGGTGGTGTTGCAGTCATGGGATACCTCATGTTTGGTAACAGCACTTTGTCTCAGATAACATTGAATATGCCAAAGGGTGCATTTGCTTCCAAAGTTGCATTATGGACAACAGTAATTAATCCATTCACTAAATATCCGTTTTGCCAAAAATTGGTTGTTTATCCAAGTTCAAAATGTGGAGACAGCTTTAAATGTGGATATGATTTATGA 1359 0.418 MASNSNNNNNMDRERDLEFVFDQNDEDANEGEQQDIEAVKFESESSSESGSDDDEGRSHRAQPESFSSQQWPQSYKETTDSYTIAAAPNFESFIRGPSFLYSSFVNRSKSSLEIDGKIPFLSGREGSVTQSTWWEKASIQRHVTGELPIGYGCSFTQTVFNGLNVMAGVGLLSTPYTVNQAGWASMLVMLFFAVVCCYTATLLRCCFESREGIISYPDIGEAAFGRYGRIVVSVILYTELYSYCVEFIILEGDNLTSLFPGTSFDLRGLHLDSVHLFGILTALLILPTVWLKDLRIISYLSAGGVVATLLIVICVFCVGTIDGIGFHHTGQVVRWSGIPFAIGIYGFCFAGHSVFPNIYQSMADKREYTKALLTCFVLCILIYGGVAVMGYLMFGNSTLSQITLNMPKGAFASKVALWTTVINPFTKYPFCQKLVVYPSSKCGDSFKCGYDL* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1159 452 Gene3D Amino acid/polyamine transporter I 152 426 - -
Dod07g1159 452 Pfam Transmembrane amino acid transporter protein 154 430 IPR013057 -
Dod07g1159 452 MobiDBLite consensus disorder prediction 1 74 - -
Dod07g1159 452 MobiDBLite consensus disorder prediction 33 61 - -
Dod07g1159 452 PANTHER AMINO ACID TRANSPORTER AVT1A 46 435 - -
Dod07g1159 452 PANTHER OS05G0424000 PROTEIN-RELATED 46 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1159 Dod-Chr7 28537220 28541262 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1159 6 428 Amino Acid or Auxin Permease AAAP Family AT2G41190 61.060 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1159 K15015 - gmx:100790344 692.575