Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1150 ATGTCCCAGCCATGTACTATGATTGTAACAATAATTGTTGTTCTTGTACAAGTAATTGTGGGAGTGAGTTCACTTTCAGATGCTGATAAGATAAGCACTTTGCCTGAGCAACCACCAGTCAAGTTCCAGCAATATGCTGGTTACATTACAGTGGATGAGAAGCAGCAGAGAGCATTGTTTTACTACTTTGCTGAAGCAGAAGTAGAACCAGCATCCAAGCCACTAGTTCTCTGGTTAAATGGAGGGCCTGGTTGTTCTTCTGTTGGAGCTGGAGCTTTTGTTGAGCATGGCCCTTTCAAACCCAGCGAAAATGGTCTTGTGAAAAATGATTATAGTTGGAACAATGAGGCAAACATGCTCTACTTGGAATCCCCGGCAGGTGTTGGTTTCTCCTACTCCACCAATAAATCTTTCTATGACTATGTGAACGATGAAATGACAGCAAGGGATAATCTTGTTTTCCTGCAACATTGGTTCACTAAATTTCCGGAGTACAAAAACAATGACTTCTTTATCACAGGGGAGAGCTATGCAGGCCACTATGTACCACAACTTGCACAACTCATTATTCAAAGCAAGACAGACTTCAATCTCAAGGGTATAGCAATAGGGAATCCTCTTCTGGAATTTAACACAGATTTCAACTCCAGAGCCGAGTTTCTCTGGTCCCACGGACTAATATCAGACTCAACTTACGAAATCTTCACTAAAGTCTGCAACTATTCCCAAATTAGGAGACAAATTCAAAGTGGGACACTTAGTGGCGTTTGTGCAGGAGTAAATAAACTAGTGTCAAAGGAGGTCAGTAGATACGTTGATTCATATGATGTTACTCTTGATGTGTGTCTGTCATCAGCAGAACAACAAGCCTATGTGCTCAATCAACTGACTCAACTGCAAGAGGGAGGGAAGATAGATGTCTGCGTGGAAGATGAAACAATCACGTACTTGAACAGGAAAGAAGTGCAGCAAGCTCTCCATGCTAAGCTTGAAGGGATCACTAGATGGTCAACATGCAGCGACGTTCTCAGATATGACATGCAGAATCTAGAGGTTCCAACAATTTCTATTCTTGGGACACTTGTTAAGTCTGGCATCAGAGTTCTAGTATACAGTGGAGATCAGGATTCAGTCATCCCATTGCTTGGAACAAGATCGCTTGTGAATGGGTTGGCTAAGGAGTTAGGACTTAATACAACAGTGTCTTACAGAGCATGGTTCGAAGAAAGACAGGTAGCTGGATGGACACAATTATATGGTGATACCTTATCATTTGCTACTATTAGAGGAGCATCTCATGAAGCTCCGTTTTCACAACCAGAGAGATCATTGGTGCTGCTAAAAACATTTCTGGAAGGAAAGCCACTGCCAGAACCATTCTCTTAA 1386 0.4214 MSQPCTMIVTIIVVLVQVIVGVSSLSDADKISTLPEQPPVKFQQYAGYITVDEKQQRALFYYFAEAEVEPASKPLVLWLNGGPGCSSVGAGAFVEHGPFKPSENGLVKNDYSWNNEANMLYLESPAGVGFSYSTNKSFYDYVNDEMTARDNLVFLQHWFTKFPEYKNNDFFITGESYAGHYVPQLAQLIIQSKTDFNLKGIAIGNPLLEFNTDFNSRAEFLWSHGLISDSTYEIFTKVCNYSQIRRQIQSGTLSGVCAGVNKLVSKEVSRYVDSYDVTLDVCLSSAEQQAYVLNQLTQLQEGGKIDVCVEDETITYLNRKEVQQALHAKLEGITRWSTCSDVLRYDMQNLEVPTISILGTLVKSGIRVLVYSGDQDSVIPLLGTRSLVNGLAKELGLNTTVSYRAWFEERQVAGWTQLYGDTLSFATIRGASHEAPFSQPERSLVLLKTFLEGKPLPEPFS* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1150 461 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 8 459 IPR001563 GO:0004185|GO:0006508
Dod07g1150 461 ProSitePatterns Serine carboxypeptidases, serine active site. 172 179 IPR018202 GO:0004185
Dod07g1150 461 Gene3D alpha/beta hydrolase 26 283 IPR029058 -
Dod07g1150 461 PANTHER CARBOXYPEPTIDASE 8 459 - -
Dod07g1150 461 Gene3D - 308 343 - -
Dod07g1150 461 Gene3D - 355 453 - -
Dod07g1150 461 Pfam Serine carboxypeptidase 37 453 IPR001563 GO:0004185|GO:0006508
Dod07g1150 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 109 121 IPR001563 GO:0004185|GO:0006508
Dod07g1150 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 423 436 IPR001563 GO:0004185|GO:0006508
Dod07g1150 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 132 IPR001563 GO:0004185|GO:0006508
Dod07g1150 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 183 IPR001563 GO:0004185|GO:0006508
Dod07g1150 461 SUPERFAMILY alpha/beta-Hydrolases 35 457 IPR029058 -
Dod07g1150 461 ProSitePatterns Serine carboxypeptidases, histidine active site. 423 440 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1150 Dod-Chr7 27747258 27751186 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1150 316 456 Calmodulin-binding Proteins AT2G22960 27.660 1.47e-17 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1150 K16297 - gmx:100805028 815.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1150 07 27747258 27751186 Dod07g1150 07 27747258 27751186 ECH