Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1118 ATGCAAGCCTTTGAATCGAACTTCAGCCTTTGCTCACAGTCACTGCAACCTTCAAATTCGGAAACCATCAACCCCAGCCTCAGTTTCGACATCAGCATCAACGATTACTTGCAACCCCAAGAAGTTCCCATTAGCAACTTGGCACAAAACTATGTTTCCAGCCATCCCCACATTCAATTTCCTCATACCTCTTTCCCTAACCCCCGAAGATCCTCAAACCTAAGCAACCGCAGGCCCTCCTTGAACATCACAGTCCCTTCCATAAGACCAGGTCTCTCAACCTTCTCACGACACAGTTCTTCAGACAGTACTAGTGACACTAGAGAGGACAAGCATTACAGAGGGGTTAGAAGGCGACCATGGGGAAAGTTTGCAGCAGAGATTCGTGACCCGAATCGAAAAGGATCAAGGGTGTGGCTCGGAACCTTTGACACAGCCATAGAAGCCGCTAAAGCATATGACAGAGCAGCTTTCAGGATGAGAGGAAGCAAAGCTATACTGAACTTCCCTCTTGAGATTGGGGATTCTGCAGAGTCTATTTCTTGCAGCATGAAGGTTGGCGAGAAGAGGAGAAGAGATAAAGAGAATGGAGGGAGTGTTGTAGAGAGTAACAAGCAAGTGAAGAAAGAAGAGTGCTGTTCCAAAGGACCTGCAACGGTTTGCCCTTTGACTCCCTCATGTTGGAAAGGGTTTTGGGACACTGATGTTATGGGAACAATCTTTAGTGTGCCTCCTTTGTCACCCTTATCCCCACTCATGGTTGCTTGA 768 0.474 MQAFESNFSLCSQSLQPSNSETINPSLSFDISINDYLQPQEVPISNLAQNYVSSHPHIQFPHTSFPNPRRSSNLSNRRPSLNITVPSIRPGLSTFSRHSSSDSTSDTREDKHYRGVRRRPWGKFAAEIRDPNRKGSRVWLGTFDTAIEAAKAYDRAAFRMRGSKAILNFPLEIGDSAESISCSMKVGEKRRRDKENGGSVVESNKQVKKEECCSKGPATVCPLTPSCWKGFWDTDVMGTIFSVPPLSPLSPLMVA* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1118 255 ProSiteProfiles AP2/ERF domain profile. 112 170 IPR001471 GO:0003700|GO:0006355
Dod07g1118 255 Pfam AP2 domain 112 162 IPR001471 GO:0003700|GO:0006355
Dod07g1118 255 MobiDBLite consensus disorder prediction 58 101 - -
Dod07g1118 255 Gene3D AP2/ERF domain 111 172 IPR036955 GO:0003700|GO:0006355
Dod07g1118 255 MobiDBLite consensus disorder prediction 188 208 - -
Dod07g1118 255 MobiDBLite consensus disorder prediction 58 113 - -
Dod07g1118 255 CDD AP2 111 170 IPR001471 GO:0003700|GO:0006355
Dod07g1118 255 PRINTS Ethylene responsive element binding protein signature 113 124 IPR001471 GO:0003700|GO:0006355
Dod07g1118 255 PRINTS Ethylene responsive element binding protein signature 152 172 IPR001471 GO:0003700|GO:0006355
Dod07g1118 255 SMART rav1_2 112 176 IPR001471 GO:0003700|GO:0006355
Dod07g1118 255 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 45 244 - -
Dod07g1118 255 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 6 45 244 - -
Dod07g1118 255 SUPERFAMILY DNA-binding domain 112 172 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1118 Dod-Chr7 23651435 23652652 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1118 71 248 AP2-EREBP Transcription Factor Family AT5G51190 52.660 5.00e-55 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Dod07g1118 AP2 4.6e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1118 K09286 - gmx:100795866 259.225