Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1117 ATGGGAAAGCCCAACGAAGAACAGCAACCTCTACCTCCCGACGTGGCCACCGAGGACCCGCGGCGGAATGCGGCGGCGGGGTGCGGTGGCTGCCCCTTCTCTGTTGGCCCCAGATGTATCCTCGTCCTTCTCTTCTCGGCCGCCGTGTTCCTCTCCGCTCTGTTCTGGTTGCCTCCGTTTGTTCACTACGCAGATCAGAGGGATCTGCGCTTCGATTCACAGTATAGAGGTCATGATATTGTTGCAAGATTTTTTGTTGAGAGGCCAGTTTCTTTGTTGGAAGACAACATCTTGCAGCTTGCTGACGACATTTTTGAAGAGATTGGAGTTCCCTCTACCAAAGTGGTCATCTTGTCTCTAGATCCCGAACTGGGGTCAAACACAACAAAAGTGGTATTTGCAGTTGATCCCGATGGCAAATATTCAGAAATGTCTTCGGCTACCCTTAGTTTGATTAAATCATCATTTAAATACCTGGTTATGCGGCAATCATTTCTCCAACTCACTCCATCATTGTTTGGAGCCCCCTCCTCTTTTGAGGTCCTGAAATTTAAGGGAGGAATCACTATAACTCCACAACAGAATGTGTTTCCTCTGCAGACAGTACAATCACTATTCAACTTTACTTTGAAATTCTCTATTTACCAAATACAATCAAATTTTGATGAACTGACGAGTCAGCTAAAGTCTGGATTACATTTGGCACCTTATGAGAAGTTGTATGTCATCTTATCGAATTCTGAAGGTTCAACAGTAGCTCCTCCCACTATAATTCAGTCATCTGTCCTACTTGCAATTGGGATTCCTCCATCAAAGGAGAGGCTAAAGCAACTAGCGCAAACCATCACAGGACCTCGTTCAGGGAACCTTGGCTTGAATAACACTCAATTTGGTAGGGTTAAGCAGGTTCGACTTTCGTCCATCTTGCAACATTCCCTTCATGGAAGTCGGGGTAGTGGGTCTGCATGGTCACCTTCTCTTGCTCCTCTCCCTCCACCACACCACCACCACCACCACCACAGTGCCCATCTATATACTGCAACGTCACCTGCATCTGCACCTGTAACTAGGACAGGTGCAATTCCTCCTGAGGTTGGTTCTCCTACTGCTGCACATGTGCCTGCAACAGGGAGAAGCAATCAGGCTCAGCCTCCTAGTTGTCGAACTGTGTATAAGAAGAGGTCTACTCGGATTGCTCCGGAACATGTTCATCTGACTCCTGCTGTTGCCCCCACTGCTTCTCCACACTATCCTGTTACCTCACCAAAACCGCAGGTTGAATCCCCAGCATACACCTCTCATTCAGTTCTTGCTTTGAGTCCTTTACCGAATGTGGCTTTCACCCATGTTCAGCCCCCTCCTGAGAATGAACCAGCTGCAGCACCTTCCAATGCAAATTTTCTTGGGCCATCACCATCTTCATCTTCTGCAGGTTCTCTTGGGACTGTTAAATGGGCATCCCTAATGTTTGTAGTACTTGTATTACATGTATAA 1494 0.4732 MGKPNEEQQPLPPDVATEDPRRNAAAGCGGCPFSVGPRCILVLLFSAAVFLSALFWLPPFVHYADQRDLRFDSQYRGHDIVARFFVERPVSLLEDNILQLADDIFEEIGVPSTKVVILSLDPELGSNTTKVVFAVDPDGKYSEMSSATLSLIKSSFKYLVMRQSFLQLTPSLFGAPSSFEVLKFKGGITITPQQNVFPLQTVQSLFNFTLKFSIYQIQSNFDELTSQLKSGLHLAPYEKLYVILSNSEGSTVAPPTIIQSSVLLAIGIPPSKERLKQLAQTITGPRSGNLGLNNTQFGRVKQVRLSSILQHSLHGSRGSGSAWSPSLAPLPPPHHHHHHHSAHLYTATSPASAPVTRTGAIPPEVGSPTAAHVPATGRSNQAQPPSCRTVYKKRSTRIAPEHVHLTPAVAPTASPHYPVTSPKPQVESPAYTSHSVLALSPLPNVAFTHVQPPPENEPAAAPSNANFLGPSPSSSSAGSLGTVKWASLMFVVLVLHV* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1117 497 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 496 - -
Dod07g1117 497 MobiDBLite consensus disorder prediction 449 479 - -
Dod07g1117 497 MobiDBLite consensus disorder prediction 373 390 - -
Dod07g1117 497 PANTHER F20B24.21 1 496 - -
Dod07g1117 497 MobiDBLite consensus disorder prediction 1 21 - -
Dod07g1117 497 MobiDBLite consensus disorder prediction 313 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1117 Dod-Chr7 23540169 23551746 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1117 22 496 C3H Transcription Factor Family AT3G10810 46.584 6.78e-96 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1117 - - gmx:100818532 597.816