Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1106 ATGACAGAAGGGAAGGTTGCTCCTGATCCAGTAGCGATTGATGCTCCTGGTGGTTTTCTTTTTGAGTGGTGGTCTGTTTTCTGGGATATTTTTATTGCAAGGACAAATGAGAAACATTCTGACACTGCTGCAGCATATTTAGAGGCTCATCAGATCAAATCGAAAGAGCAACAGCAGCTGCAAATACAGCAGTTGCAACTAATGCGCCAAGCTCAGCTGCAAAGAAGGGATTCTAATCATCCTGCAATTGGTGGTCCTGTAAATGCTATCAGTACAGGAGCGGTGCTTGGGCAATCTACTGCCAGTTCTTTGGCTGCAAAAATGTACGAGGAGCGGATGAAGCACTCTAACCCTATGGATACAGAGACATCCCAGCCACTTCTAGATGCTAGAACGGCCCTTTTGAAATCTACAAATCATCCTGGTCAGATGGTCCAAGGAAGTTCTGGAAGTGTGACAGCAGCTTTGCAGCAAATCCAGGCTCGAACTCAGCAAACTCCTCAGGAGATCAAAGCTGAAGTCAACATTGGCACCGTGCAGAAGTCTTTGGCTATGGATCCTTCTTCAATTTATGGTCAGGGAGGAATGCGGTCGAAGCCTGGAATTGCAAATGCAGGAACAAATCCCGGAGTTGGTGGTCTCACATTGAAAGGATGGCCTTTAACTGGCATTGATCAAATTCGTCCTGGTTTTGGAGCACAAATTCAAAAGCCTCTCCTTCAGAGTGCAAATCAGTTTCAACTTTTGCCACAACAGCAACAACAGCAGCTCCTCGCACAGCTTCAGGCACAGGGAAATATTAGTAGTTCCCCAGTGTATGGAGATATGGATCCACAACGATTAAGAGGGTTAGGAAGGGGAAGTTTGAGTGTTAAAGATGGTCAACCTATTGCAAATGATGGATCAATAGGATCTCTGATGCAATCCACTTCGTCCAAGATCAATATGCCACAGATCCAACAATCCACTTCCCAGCAACAGCAGGATCCTTTGCAGACGCAGCAATTGGTACAGAATAATCGGAAAAGGAAAGGGCCTACATCTTCAGGAGCTGCCAACAGTACTGGTACAGGAAATACTCTTGGCCCGTCTAATTCCCAGCCATCAACTCCATCTACGCATACTCCTGGTGATGGAGTTGCTATGGCGGGTAATTTGCAGAATGTTGCTGGTGTATCCAAAGGTTTGATGATGTATGGTACTGATGGAGCAGGTGGTCTTCCATCTTCCACAGACCAGCTGGATGACATTGAACATTTTGGAGATGTTGGCTCCTTAGATGACAACGTCGAATCATTTCTCTCACAGGATGATGGTGATGGAAGGGACTTATTTGGCACGCTGAAACAAAACCCTTCTGAGCATGCTACAGATGCGTCAAAAGACTTCTCCTTCAGTGAAGTTGGTTCTATACGCAAAAGCAACAGCAAAGTTGTTTGCTGTCATTTTTCTTCAGATGGTAAATTGTTAGCTAGTGCTGGACATGACAAGAAGGTTGTTCTATGGAACATGGAGACACTGCAGACAGAGAGCACTCCAGAAGAGCACACTCTTATTATTACTGATGTTCGCTTCAGACCCAATTCAACTCAGCTGGCAACATCTTCATATGATACAACTGTGAGGCTTTGGGATGCTGCAAATCCAAGCTTTTCTTTACAGGCATATAGTGGTCATACATCACATGTGATGTCCCTTGATTTCCACCCAAAGAAGAGTGACCTTTTCTGTTCTTGTGATGTTAACAATGAGATTCGCTTCTGGAATATTAGTCAATATTCTTGCACTCGTATTTCTAAGGGAGGATCTTCACAAGTGAGGTTTCAGCCAAGGATGGGACATCTTCTGGCTGCAGCAGCTGGCAGTATTGTGTCTCTATTTGATGTTGAGACTGACAGGCAGATGCACTCATTACAGGGACATACTACTGACGTACACTGTGTCTGTTGGGATACAAACGGAGATTACTTGGCATCTGTGAGTGAAGAATCTGTGAAAGTATGGTCGCTTGCCTCTGGGGATTGCATTCATGAGTTTAGTAGTTCCAGTGGAAATATGTTTCATTCTTGTGTTTTTCACCCGAGTTACTCAACACTCTTGGTTATTGGAGGTTTCCAGTCATTGGAGCTATGGAACATGGCTGAAAATAAATGCATGATAATACCAGCTCATGAGTGTGTGATATCTGCTCTAGCACAATCACCGGTGACAGGGATGGTTGCTTCTGCCAGTCATGACAAATCGGTAAAGATTTGGAAATAA 2262 0.4452 MTEGKVAPDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSDTAAAYLEAHQIKSKEQQQLQIQQLQLMRQAQLQRRDSNHPAIGGPVNAISTGAVLGQSTASSLAAKMYEERMKHSNPMDTETSQPLLDARTALLKSTNHPGQMVQGSSGSVTAALQQIQARTQQTPQEIKAEVNIGTVQKSLAMDPSSIYGQGGMRSKPGIANAGTNPGVGGLTLKGWPLTGIDQIRPGFGAQIQKPLLQSANQFQLLPQQQQQQLLAQLQAQGNISSSPVYGDMDPQRLRGLGRGSLSVKDGQPIANDGSIGSLMQSTSSKINMPQIQQSTSQQQQDPLQTQQLVQNNRKRKGPTSSGAANSTGTGNTLGPSNSQPSTPSTHTPGDGVAMAGNLQNVAGVSKGLMMYGTDGAGGLPSSTDQLDDIEHFGDVGSLDDNVESFLSQDDGDGRDLFGTLKQNPSEHATDASKDFSFSEVGSIRKSNSKVVCCHFSSDGKLLASAGHDKKVVLWNMETLQTESTPEEHTLIITDVRFRPNSTQLATSSYDTTVRLWDAANPSFSLQAYSGHTSHVMSLDFHPKKSDLFCSCDVNNEIRFWNISQYSCTRISKGGSSQVRFQPRMGHLLAAAAGSIVSLFDVETDRQMHSLQGHTTDVHCVCWDTNGDYLASVSEESVKVWSLASGDCIHEFSSSSGNMFHSCVFHPSYSTLLVIGGFQSLELWNMAENKCMIIPAHECVISALAQSPVTGMVASASHDKSVKIWK* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1106 753 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 721 753 - -
Dod07g1106 753 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 513 545 - -
Dod07g1106 753 CDD WD40 467 753 - -
Dod07g1106 753 ProSiteProfiles Trp-Asp (WD) repeats profile. 556 598 IPR001680 GO:0005515
Dod07g1106 753 PRINTS G protein beta WD-40 repeat signature 490 504 IPR020472 -
Dod07g1106 753 PRINTS G protein beta WD-40 repeat signature 532 546 IPR020472 -
Dod07g1106 753 PRINTS G protein beta WD-40 repeat signature 740 753 IPR020472 -
Dod07g1106 753 MobiDBLite consensus disorder prediction 338 376 - -
Dod07g1106 753 MobiDBLite consensus disorder prediction 338 383 - -
Dod07g1106 753 ProSitePatterns Trp-Asp (WD) repeats signature. 490 504 IPR019775 -
Dod07g1106 753 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 1 753 IPR044716 GO:0003714
Dod07g1106 753 MobiDBLite consensus disorder prediction 269 308 - -
Dod07g1106 753 Gene3D - 446 603 IPR015943 GO:0005515
Dod07g1106 753 ProSiteProfiles Trp-Asp (WD) repeats profile. 638 678 IPR001680 GO:0005515
Dod07g1106 753 Pfam WD domain, G-beta repeat 512 545 IPR001680 GO:0005515
Dod07g1106 753 Pfam WD domain, G-beta repeat 553 589 IPR001680 GO:0005515
Dod07g1106 753 Pfam WD domain, G-beta repeat 634 669 IPR001680 GO:0005515
Dod07g1106 753 Pfam WD domain, G-beta repeat 476 503 IPR001680 GO:0005515
Dod07g1106 753 Pfam WD domain, G-beta repeat 721 753 IPR001680 GO:0005515
Dod07g1106 753 SMART WD40_4 672 712 IPR001680 GO:0005515
Dod07g1106 753 SMART WD40_4 592 628 IPR001680 GO:0005515
Dod07g1106 753 SMART WD40_4 549 589 IPR001680 GO:0005515
Dod07g1106 753 SMART WD40_4 506 545 IPR001680 GO:0005515
Dod07g1106 753 SMART WD40_4 714 753 IPR001680 GO:0005515
Dod07g1106 753 SMART WD40_4 631 669 IPR001680 GO:0005515
Dod07g1106 753 SMART WD40_4 464 503 IPR001680 GO:0005515
Dod07g1106 753 ProSiteProfiles Trp-Asp (WD) repeats profile. 471 512 IPR001680 GO:0005515
Dod07g1106 753 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 471 506 - -
Dod07g1106 753 ProSiteProfiles Trp-Asp (WD) repeats profile. 721 753 IPR001680 GO:0005515
Dod07g1106 753 SUPERFAMILY WD40 repeat-like 465 753 IPR036322 GO:0005515
Dod07g1106 753 Coils Coil 55 75 - -
Dod07g1106 753 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 556 591 - -
Dod07g1106 753 MobiDBLite consensus disorder prediction 441 460 - -
Dod07g1106 753 MobiDBLite consensus disorder prediction 313 332 - -
Dod07g1106 753 PANTHER TRANSCRIPTIONAL COREPRESSOR LEUNIG_HOMOLOG 1 753 - -
Dod07g1106 753 ProSiteProfiles Trp-Asp (WD) repeats profile. 513 545 IPR001680 GO:0005515
Dod07g1106 753 Gene3D - 604 753 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1106 Dod-Chr7 22870376 22923253 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1106 465 699 U-box Gene Family AT2G33340 26.939 5.79e-16 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Dod07g1106 WD40 0.013 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1106 - - gmx:100797756 1283.09