Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1089 ATGGCGAAGGGTGACGACGCCGTGAGAAGGAAGAAGAACAAAGCCATTTGCAAAAAGCTTAGAAGGAAGAACGACTCTTCCTCTCTATCTGCAAAGGTAGCCAACGCCATCGCCGCCAAGAAGCGACGCAAGGCCGGAAAACGCCGCATTTGCGAGGGGATGTGCTTTAGCCTGCCTACTCCGGATGATCCATTCAATGATGGACATGGGAAACCGAAATTCAAAATAACTGGTCATGAAAAGAAAACACATTCCGTGAAAGAGATGGTTCCTCTTAGTGGGAAGAGTGTGGCTAGAGGGAAAGGTGCAGTTGGTGGAAATATTTCTGAGAAATCAAATCATTTACAAATGGAAAATGAGTCTGTCACTGCCGCCAATAACCTTAGTCCTAACTGTTTTAGTAACTCAGAAAGGAAAAATATCGAGGTGACTGTGATAGCTGACCTTTGCGGTGGTGCCCAAAAGCATGAGTGTCAATCGTCAGAGTTCCCTTCTAAGTTTGTTTTTTTGTGTCTAAGTTCAATTGAAAATGCATTGCGACATGGAGATGCATACTCTGATGGAGAGGGTAATTCTTTGTTTGTTGACTCATGGGGATTAGAGTTTTTGAAGTGCTATTCTGCTGGGAAAGATCTGATGGAAACCAGTGGAACCTCTGCCACCATCGAGCAAGTTGCATGGATGGTTTCTGCTGCGGCAGATACATTTGTGAGAAAAGAGAAGCAAGGCTTATCCTTTGCCAGTCCTTTTCTTTTATTCCTTGTACCTTCCCAAGTGAAAGCTGTACAGGTCCGAACAGTTTGCAGGCCTTTGAAGTCACTCGGAATACATACAGTGAGTATACATCCTGGTGCTACCTTAGATCATCAGATTCAAGGTCTGAAAAGTTGTGAGCCTGAGTTTCTTGTTTCTACTCCAGAGAGGCTTCTGGAGCTTCTTTGTTTGAAGGCAGTTGACATATCTGGCGTCTCCATGCTGGTTGTTGATGGGCTTAATACTATTTGTAGTGCTGGCCACACTGATGCTATAAAATCCATCAAGAAGTTTATTTCTGGCAATCCCCATTTTGTGGTTTTCAATGATTGCTTCAGTCCTAAGTCTGTCCCAATGGTTCGACATCTTCTAACCCAACCAATTTGTAGACTCTCACTCAATAATTCAATTACCAGCCTAAGTTCATGCATTATCCAGTCTGTTAAAGTGTGTACATCAGAAGAAGATAAGCTTCTTAAGAGCATTGAAGCCCTGGATCAATTTCAGAACAGCCGTACTCATAATTCAAACATGCTATTTATCTTAAGGAAAGACATGAAGTATCATAAGTTGGTCAAAAAACTCAAATCCAAAGGTTGTTCCACTTCAGTTGATTCTAATGCAGCATGCTTTAATGACAGTATGGATTCAAACGGCAGAATAAGTCCAGTGGTTTTTATGGAAGATATGGAGCATATCTTCACCGCACATATAGGGCAGTACGATGCTGTAGTCCTACCCAGTTTTGTACCCTCGATGGACACTTACGTGCATATCTTGACAAAGATGGCCCGCGAAAGTGTCAATGGTGTGTTGCAGAGTTTCTTAACGGAAGGGGATAAAGAACTTGCTGGGCAACTCATCAGAATTCTCAAACAATGCGAGCAGGAAGTGCCTCAGACCTTGCAAGATCTGCATCGTACATCATGA 1683 0.4296 MAKGDDAVRRKKNKAICKKLRRKNDSSSLSAKVANAIAAKKRRKAGKRRICEGMCFSLPTPDDPFNDGHGKPKFKITGHEKKTHSVKEMVPLSGKSVARGKGAVGGNISEKSNHLQMENESVTAANNLSPNCFSNSERKNIEVTVIADLCGGAQKHECQSSEFPSKFVFLCLSSIENALRHGDAYSDGEGNSLFVDSWGLEFLKCYSAGKDLMETSGTSATIEQVAWMVSAAADTFVRKEKQGLSFASPFLLFLVPSQVKAVQVRTVCRPLKSLGIHTVSIHPGATLDHQIQGLKSCEPEFLVSTPERLLELLCLKAVDISGVSMLVVDGLNTICSAGHTDAIKSIKKFISGNPHFVVFNDCFSPKSVPMVRHLLTQPICRLSLNNSITSLSSCIIQSVKVCTSEEDKLLKSIEALDQFQNSRTHNSNMLFILRKDMKYHKLVKKLKSKGCSTSVDSNAACFNDSMDSNGRISPVVFMEDMEHIFTAHIGQYDAVVLPSFVPSMDTYVHILTKMARESVNGVLQSFLTEGDKELAGQLIRILKQCEQEVPQTLQDLHRTS* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1089 560 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 ISOFORM X1 1 553 - -
Dod07g1089 560 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 1 553 - -
Dod07g1089 560 Pfam DEAD/DEAH box helicase 246 350 IPR011545 GO:0003676|GO:0005524
Dod07g1089 560 MobiDBLite consensus disorder prediction 1 28 - -
Dod07g1089 560 Gene3D - 238 388 IPR027417 -
Dod07g1089 560 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 247 379 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1089 252 556 Eukaryotic Initiation Factors Gene Family AT1G72730 21.698 4.79e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1089 - - gmx:100809099 735.332