Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1066 ATGCAGATGATGCTTGAAATTGAAAATGATCCAGATATTGTTGACAACTCCCATTTAGATATTAAAACTATAGAGAAAAATGTGGCAGCCAAAGCCTCCAGGGAAAAAGAACCACATACTCACAGCCAAATTTTTAAGTACGCATATGCTCAATTGGAGAAAGAGAAAGCTCAGCAACAAGAAAACAAGAACCTTACCTTCTCAGGAGTAGTTAGTATGGCCACCAAAAGTGAACAAAGGAAAAGGCCTCTAATAAAAATTTCTTTCAAAGATCTAACTCTTACTTTGAAAGCGCAAAACAAACATATATTGAGATGTGTTACAGGGAAAATTAAACCTGGGCATATTACTGCCGTCATGGGTCCATCTGGTGCTGGCAAGACAACATTTCTTTCAGCAATAGCCGGAAAGGCATTTGGATGCACTGTGACTGGTTCTGTTCTCATAAATGGAAAGAATGAATCAGTTCACTCCTATAAGAAAATTATTGGCTTTGTGCCACAAGATGATGTAGTTCATGGAAACCTGACAGTAGAAGAGAATTTCCGGTTCAGTGCACAGTGCAGGCTATCTGCTGAATTGTCAAAACCAGACAAAGTTCTGGTTGTTGAAAGAGTTATTGAATTCTTGGGGCTTCAGTCCGTGCGGAATTCCTTGGTTGGAACTGTAGAAAAGCGAGGGATCTCTGGAGGCCAAAGGAAGCGTGTAAATGTTGGACTGGAAATGGTCATGGAACCTTCACTTTTGATCTTGGATGAACCCACATCTGGTTTGGACAGTGCATCATCTCAGCTCCTTCTTAGAGCATTAAAACGTGAAGCTCTTGAAGGAGTGAACATTTGCATGGTGGTTCACCAACCCAGTTATGCATTGTTCAGGATGTTTGATGACTTGATACTCCTTGCGAAAGGCGGTCTTACTGTGTATCATGGACCAGTCAAGAAGGTTGAAGAATATTTTGGTGGCCTTGGGATCAGTATCCCAGAGCGGGTTAATCCTCCTGATTACTTCATTGACATTTTGGAGGGCATAGCAGTTCCTGGTGGAAGCTCAGAAGTCAGTTATAAAGATCTGCCAGTTAGATGGATGCTTCATAATGGATACCCTGTACCTCTTGATATCCAGAAGAATGCTGCACAATTTGACGTGCACTTAACTGTAAATCCATCTAAAGAAATAGATCTTGATAGCTCCGGCCATGACGAAAAAAGTTTTGCTGGAGAATTATGGCATGATGTTAGAAACATTGTGGAAGTGAATGGGGAAAAGATAAGACTGAGCTTTTTAAAATCCAAGGATTTATCTAACCGGAAAACTCCTGGTATATTCAAGCAATACAAGTATTTCCTTATACGGGTTGGGAAGCAGCGATTACGGGAAGCTAAAATCCAAGCCATAGATTATCTAATATTATTACTTGCTGGAGCTTGCTTAGGATCGCTTACTAAAGGAAATGATCAGACGTTCGGTGGACCTGGATACATCTATACAGTGATTGCTGTATCTCTTCTATGCAAAATAGCAGCCTTGAGATCATTTTCTCTGGATAAATTACACTACTGGAGGGAGAGTGATTCTGGAATGAGCAGCTTGGCTTACTTTCTCTCTAAAGACACAATAGATCATTTTAATACTGTAGTCAAACCTGTAGTGTACCTCTCTTTGTTCTATTTCTTCACCTATCCAAGATCAACTTTCACAGATAATTACATTGTGCTGCTTTGTCTAGTATACTGTGTGACTGGCATAGCATATGCATTGGCCATATTTTTTGAACCTGGCGCAGCCCAACTTTGGTCAGTACTTCTTCCGGTTGTTTCAACACTTGTTGCAACACAATCCAAAGATAGTACATTTTTGAAGGCTATCGCTAATTTATGCTACTCTAAGTGGGCTTTAGAAGCATTCGTAATTGCAAATGCTGAAAGGTATCATGGAGTGTGGCTCATAACACGTTGTGGTTCACTAATGAGAAGTGGCTATAATATTCACGACTGGAGTTTGTGCATATCCATCCTCTTTCTTATGGGTGTGATCGCTCGGGCAATAGCTTTTTTCTGTATGCTTGTCTTCCAAAAGAAGTAA 2085 0.4034 MQMMLEIENDPDIVDNSHLDIKTIEKNVAAKASREKEPHTHSQIFKYAYAQLEKEKAQQQENKNLTFSGVVSMATKSEQRKRPLIKISFKDLTLTLKAQNKHILRCVTGKIKPGHITAVMGPSGAGKTTFLSAIAGKAFGCTVTGSVLINGKNESVHSYKKIIGFVPQDDVVHGNLTVEENFRFSAQCRLSAELSKPDKVLVVERVIEFLGLQSVRNSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSQLLLRALKREALEGVNICMVVHQPSYALFRMFDDLILLAKGGLTVYHGPVKKVEEYFGGLGISIPERVNPPDYFIDILEGIAVPGGSSEVSYKDLPVRWMLHNGYPVPLDIQKNAAQFDVHLTVNPSKEIDLDSSGHDEKSFAGELWHDVRNIVEVNGEKIRLSFLKSKDLSNRKTPGIFKQYKYFLIRVGKQRLREAKIQAIDYLILLLAGACLGSLTKGNDQTFGGPGYIYTVIAVSLLCKIAALRSFSLDKLHYWRESDSGMSSLAYFLSKDTIDHFNTVVKPVVYLSLFYFFTYPRSTFTDNYIVLLCLVYCVTGIAYALAIFFEPGAAQLWSVLLPVVSTLVATQSKDSTFLKAIANLCYSKWALEAFVIANAERYHGVWLITRCGSLMRSGYNIHDWSLCISILFLMGVIARAIAFFCMLVFQKK* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1066 694 PANTHER ABC TRANSPORTER G FAMILY MEMBER 24 27 691 - -
Dod07g1066 694 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 321 IPR027417 -
Dod07g1066 694 SMART AAA_5 113 305 IPR003593 -
Dod07g1066 694 CDD ABCG_EPDR 85 311 - -
Dod07g1066 694 Pfam ABC transporter 106 256 IPR003439 GO:0005524
Dod07g1066 694 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 87 328 IPR003439 GO:0005524
Dod07g1066 694 ProSitePatterns ABC transporters family signature. 228 242 IPR017871 GO:0005524
Dod07g1066 694 Pfam ABC-2 type transporter 285 694 IPR043926 GO:0140359
Dod07g1066 694 Gene3D - 85 321 IPR027417 -
Dod07g1066 694 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 27 691 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1066 Dod-Chr7 20720205 20743751 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1066 111 307 Calmodulin-binding Proteins AT2G36910 28.713 3.68e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1066 - - gmx:100783798 1183.7