Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1021 ATGGCGGACGTCATGGTCATGAAAGACATCGAGGCCACAGCGTCGCTTCTCGGATTCGATCTTTCCACCATTGATCTCGGTTCCATTTGTCTCCCCCCTGGCGACGATTGTGGCATCCCCAGTGATGACGAGGATATTTACCAAGAGGATAATCTTGAGTTCGATTCTGGATTTGGTAACATTATAGTTGTGGATAACCTCCCCGTAGTACCCATGGAGAAATTCGAGAAGCTCGAAATCGTCATTCGCAAAATTTATAGCCAGATTGGTGTTATCAAGGATAACGGTCTCTGGATGCCTGTTTATCCTTCTGATTCTGACGCTGCCAAGACTTTGGGTTACTGCTTCATTGAGTATAACACCCCTCAGGAAGCTGAGCTTGCTAAAGAGAAGACTCACGGATATAAATTGGACCGTTCGCACATATTTTCAGTGAGCATGTTTGATGATTTTGACAAGTTCATGAAGGTTCCGGATCAGTGGGCTCCTCCTGAAACTAGGCCATATGCTCCAGGGGAAAATCTTCAGCATTGGCTCACTGATGCAAAAGCCCGAGATCAGTTTGTGATTCGTGCTGGTTCAGATACTGAGGTTTTGTGGAATGATGCAAGGCAGCTGAAGCCTGATCCTGTTTATAAGCGTGCATTTTGGACCGAGAGTTTTGTGCAATGGTCCTCTCTGGGCACATACTTGGCAACAGTTCACAGGCAGGGAGCAGCTGTTTGGGGAGGTGCTACGACATTCAATCGTCTCATGCGTTATGCTCATCCTCAGGTGAAATTAATTGATTTTTCACCTAGTGAGAAGTATTTGGTAACTTATAGCAGCCATGAACCAAGCAATCCTCGAGATGCTAATAGGGTTGTGATGAATATATTTGATGTAAGGACTAGTAAAGTGATGAGGGATTTTAAAGGAAGTGCTGATGATTTTGCTGTTGGAGGTGCTAGCGGTGTCACCGGGGTGTCGTGGCCTGTTTTCAAATGGAGCGGTGGAAGAGATGATAAGTACTTTGCAAGGATGGGGAAAAATGTACTTTCTGTGTATGAGACACAGACCTTTTCTCTTGTTGACAAAAAGTCCTTAAAGGTTGAAAATATAATGGACTTCAGCTGGTCTCCAACTGATCCAATTATTGCACTCTTTGTTCCAGAGATGGGGGGTGGTAACCAGCCTGCTAGGGTAAGTTTGATTCAAATCCCAAGCAAACAGGAACTCAGACAGAAGAACCTTTTCAGTGTCAGTGACTGCAAGATGTACTGGCAAAGCAATGGAGATTACCTTGCTGTTAATGTAGACCGATATACTAAAACTAAGAGGAGCACATACACAGGCTTCGAGCTTTTCCGTATTAAGGAACGCGACATACCTATTGAAGTTTTGGAGCTTGAGAATAAGAACGACAAGATCATTGCGTTTGCTTGGGAGCCTAAAGGCCATAGGTTTGCAGTTATTCATGGCGATAACCCTAAGCCTGATGTTAGCATTTACTCTATGAGGACTGCTCAGAACACTGGACGGGTTTCAAAGCTCACTACTCTGAAAGGCAAGCAGGCAAATGCTCTGTTTTGGTCACCGGCAGGTCGCTTCATTGTGCTAGCAGGGCTGAAAGGCTTCAATGGGCAGTTGGAATTTTACAATGTTGACGAACTTGAAACCATGGCTACTGCTGAACATTTTATGGCTACAGATATTGAATGGGATCCAACAGGAAGGTATGTAGCAACTTCTGTTACTTCAGTTCATGAGATGGAAAATGGTTTCAATATATGGTCTTTCAATGGCAAGCATCTCTATCGGATACTGAAGGATCACTTCTTTCAGTTCTTATGGAGACCAAGGCCACAATCTTTCTTGAGTGCCGAGAAAGAGGAGGAGATTGCAAAGAACTTGAAGAAGTACAGCAAGAAATACGAGGCGGAAGACCAGGACGTGTCGTTGCAGCTGAGCGAGCAGGAGCGTGAGAAGCGTAGGATGTTGAAAGAGGAGTGGGACAAGTGGGTCAGCGACTGGAAAGGGCTGCATGAAGAAGAGAAGTTGCAGAGGCAAATGCTTAGAGACGGAGAGGCTAGTGATGAAGAAGAGGAATACGAGGCAAAGGACATTGAGGTCGAGGAAGTGATTGATGTTTCTGAAGAGGTCGAATACGGTCAAGAGTGA 2160 0.4505 MADVMVMKDIEATASLLGFDLSTIDLGSICLPPGDDCGIPSDDEDIYQEDNLEFDSGFGNIIVVDNLPVVPMEKFEKLEIVIRKIYSQIGVIKDNGLWMPVYPSDSDAAKTLGYCFIEYNTPQEAELAKEKTHGYKLDRSHIFSVSMFDDFDKFMKVPDQWAPPETRPYAPGENLQHWLTDAKARDQFVIRAGSDTEVLWNDARQLKPDPVYKRAFWTESFVQWSSLGTYLATVHRQGAAVWGGATTFNRLMRYAHPQVKLIDFSPSEKYLVTYSSHEPSNPRDANRVVMNIFDVRTSKVMRDFKGSADDFAVGGASGVTGVSWPVFKWSGGRDDKYFARMGKNVLSVYETQTFSLVDKKSLKVENIMDFSWSPTDPIIALFVPEMGGGNQPARVSLIQIPSKQELRQKNLFSVSDCKMYWQSNGDYLAVNVDRYTKTKRSTYTGFELFRIKERDIPIEVLELENKNDKIIAFAWEPKGHRFAVIHGDNPKPDVSIYSMRTAQNTGRVSKLTTLKGKQANALFWSPAGRFIVLAGLKGFNGQLEFYNVDELETMATAEHFMATDIEWDPTGRYVATSVTSVHEMENGFNIWSFNGKHLYRILKDHFFQFLWRPRPQSFLSAEKEEEIAKNLKKYSKKYEAEDQDVSLQLSEQEREKRRMLKEEWDKWVSDWKGLHEEEKLQRQMLRDGEASDEEEEYEAKDIEVEEVIDVSEEVEYGQE* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1021 719 Gene3D - 413 634 IPR015943 GO:0005515
Dod07g1021 719 Coils Coil 621 641 - -
Dod07g1021 719 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 60 150 IPR000504 GO:0003723
Dod07g1021 719 Gene3D - 59 146 IPR012677 -
Dod07g1021 719 PANTHER BNACNNG51870D PROTEIN 5 714 - -
Dod07g1021 719 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED 5 714 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Dod07g1021 719 SUPERFAMILY DPP6 N-terminal domain-like 220 602 - -
Dod07g1021 719 PIRSF Transl_init_eIF3b 8 717 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Dod07g1021 719 Gene3D - 180 387 IPR015943 GO:0005515
Dod07g1021 719 Hamap Eukaryotic translation initiation factor 3 subunit B [EIF3B]. 48 716 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Dod07g1021 719 Pfam Eukaryotic translation initiation factor eIF2A 409 609 IPR013979 -
Dod07g1021 719 SUPERFAMILY RNA-binding domain, RBD 50 142 IPR035979 GO:0003676
Dod07g1021 719 CDD RRM_eIF3B 59 145 IPR034363 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1021 Dod-Chr7 18610568 18616263 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1021 5 714 Eukaryotic Initiation Factors Gene Family AT5G27640 76.231 0.0 1162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1021 K03253 - gmx:100779711 1306.97