Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1008 ATGGTAGATGAACTGTTCCAGGAAAAAGAGCAGAGAAAGTTAGAAACTCAAAGTCACATGCAAAATGCATCCATGCCTCAATCGTCAAAAGTTTCTCACCAAGTTTCCCCTGAGGTTCCTAACCATGTAAAAACCAAGCACATCATGGAGCTCAAGAATAAGATAAAGCACATAATTGAAGAAGGTAAAAAGGAAAAACATCGCATTTCCATGGATGCTATACTTGACAAAATCCCTCATGGAAATAAGCATTCCAAAAAGTCAAAGAAATTTGCACATGATCAGTTCGAAGACCCCACAACCAATGGAGAAGGGAAAGAATCTGCTACAAGGGGTTATGCCAATCGTCTCTCTTCTCATTCCTTCAACAAATGTCAACCGTCAACCATGAGGACATCATCTCTAAAAGAATCAGCTAGCAGATATTCTCAGTTGTATGAGACTTGTTTTAATAGTGAAGTCAATGGCCCTAAGTCTAAAAGCTTAAGATTGAGGGCAAAAGAGAAAAGTTCAATACTGAAGACCCCAAAATCCTATAAAAGGTTCCTTTCATTACCTAATCTAAAATCTTATTTCCACCGAATTGAAGATCCTTTAATCCTTCTGTCTCCCCAAAATTCAATTAGGCTATTTAATGATAGCACCTCAAGTGCAAGTGTTATTAATCAGAAGAGGAGTTTTGAAAATGTTTTTGATTCAAATAGTGGAGTTCTCTTACCTACCCTTGGTTATAAGGCAATTCAAGAAAGCATCTTGGATGATGAACAAAAGAAACTTCTTATCCGGAGTTCTTTAAAATCAGGATCAGATGTTAATGATGAGGCAAAGGCAGATAAGAGCATAAGAATTGATGGTTTGGGAAATATAAGAAATAGTGATGATGCTTCTTGTAGTGAACAAGTCACCGGCCACAGAATAGAATCTACTCAAATGCTGGGAGACGCAAACTCAGTCTTCTCCTCTGACACTAGCTTCCTTGATGAAACATTTGACATTGAGAAGTTAAACATACTAGAAGGTTTAGAATTACAACCTTGGTCTGTTGATGGCTTGGATAATATAGCTGAGCAAAAAGAGAGCATTTTGGACTACCTTGAGGTGGTTAAGAGTGGAGATAATTTTCAAAAACTAGGAACTCTAAGCAAGTGCTTAAACTATGAAGTTCCATATATTGAATTAGATCCAAGCCATGAAGCTACATTTAATTATGTGAGAAAGGTTTTAGAGTTCTCTGGGTTTACTGGCTTTGAATCCCTTGGGACATGGTATTCTGATGACCAGCCAGTTAATCCTTCAGTATATGAAGAACTAGAGGGTTGCTTGCTACTTGATCCAGGTTGTTCTGGGAATTCTAAGGAAGGTGGACAGTGTAACCATTTGCTTTTGTTTGATATAGTCAATGAGGGACTATTGGAGATTTTTGGGAGATCATACAGTTATTACCCTAAACCTTTGTCTTCTCTCTCTCATGTTCATCCATTGCCAATAGGAGACAATGTTCTCCAAAAAGTATGGACACTTATTAGCTGGTACCTAAGCTTAACATCAGAGGTTTACCCATCATTGGATTATTATGTGAGCAAAGATCTAGCAAAAAATGATGGGTGGATGAATCTTCAGTTTGATTCTGAATGTGTGGCACTTGAGCTAGATGACTTGATTTTTGATGATCTTCTGGAGGAAATTATCTACATTTAA 1698 0.3746 MVDELFQEKEQRKLETQSHMQNASMPQSSKVSHQVSPEVPNHVKTKHIMELKNKIKHIIEEGKKEKHRISMDAILDKIPHGNKHSKKSKKFAHDQFEDPTTNGEGKESATRGYANRLSSHSFNKCQPSTMRTSSLKESASRYSQLYETCFNSEVNGPKSKSLRLRAKEKSSILKTPKSYKRFLSLPNLKSYFHRIEDPLILLSPQNSIRLFNDSTSSASVINQKRSFENVFDSNSGVLLPTLGYKAIQESILDDEQKKLLIRSSLKSGSDVNDEAKADKSIRIDGLGNIRNSDDASCSEQVTGHRIESTQMLGDANSVFSSDTSFLDETFDIEKLNILEGLELQPWSVDGLDNIAEQKESILDYLEVVKSGDNFQKLGTLSKCLNYEVPYIELDPSHEATFNYVRKVLEFSGFTGFESLGTWYSDDQPVNPSVYEELEGCLLLDPGCSGNSKEGGQCNHLLLFDIVNEGLLEIFGRSYSYYPKPLSSLSHVHPLPIGDNVLQKVWTLISWYLSLTSEVYPSLDYYVSKDLAKNDGWMNLQFDSECVALELDDLIFDDLLEEIIYI* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1008 565 PANTHER TRM32-LIKE PROTEIN (DUF3741) 9 564 - -
Dod07g1008 565 MobiDBLite consensus disorder prediction 1 37 - -
Dod07g1008 565 MobiDBLite consensus disorder prediction 17 37 - -
Dod07g1008 565 MobiDBLite consensus disorder prediction 1 16 - -
Dod07g1008 565 PANTHER PROTEIN TRM32 9 564 IPR044257 -
Dod07g1008 565 MobiDBLite consensus disorder prediction 79 110 - -
Dod07g1008 565 Pfam Domain of unknown function (DUF4378) 401 561 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1008 Dod-Chr7 17878550 17881064 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1008 284 555 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 43.262 1.13e-57 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1008 - - gmx:100807303 632.098