Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1005 ATGTCTGGGAATAACAAGGAGGGGAGAGCTTTGCCAGATGGTTATTCTGTTATTTTACTATTATTATTATTGTGTCTACTTCTTTGTAGCACAGAGGGACTGAACACAGAGGGGCAAATCCTCCTAGAGTTCAAGAATGGTTTTGATGATAAGTCTAACCTTTTGGGAAATTGGAGGTCTACTGATGCAACTCCGTGTCGATGGGTAGGTGTGGATTGCACTTATGAATATAACAGTAACAATGATCCAGTTGTCATGTCTCTTAATTTGAGTTCAATGGGTCTTTCTGGAGCTCTGAATGGTAGTAGCATTGGGCGTCTGACCCATCTAACTTATCTGAATCTTGCTTACAATAGCCTGACCGGAAATATTCCCAAGGAGATTGGTGACTGCTTGAGTTTGGAATCTCTTTATTTGAACAATAATCAATTTGAGGGACTAATTCCTCCTGAATTGGGTAAGCTTTCCTCTTTGAAAAGTTTGAATATATGCAACAACAAACTCTCTGGTGTTCTTCCAGCTGAGCTTGGAAACTTGTCTTCATTGGTTGAGTTAGTGGCCTACAGCAACTTCCTCATTGGCCCTCTGCCTAATACCATTGGAAATCTTAAGAATCTTGTGACTTTCAGAGCTGGGGCAAATAACATTACTGGTATCTTGCCAAAGGAAATCGGTGGATGTAAGAGCTTGATGTATCTTGGTCTTGCCCAAAATCAGATAGGAGGGAAGCTGCCAAGTGAGATTGGGATGCTTGAAAACTTAACAGAACTCATATTATGGGAAAACCAGTTGTCAGGATCTATTCCTAAAGAGCTTGGGAATTGTAGCAGTCTTGAGACCCTTGCTTTATATTCAAATGATCTTGTTGGACCGATACCACCAGAGATTGGGAATCTCAAATCATTGAAGAAGTTGTATCTCTACAAAAATAATTTGAGTGGATCCATTACTGGGGAAATTGGAAATCTTTCTTCAGCTTTGGAAATTGATTTCTCAGAAAACTCTTTAGTAGGTGACATCCCTTCTGAGTTCAGCAAAATAAGCGGTCTACGCTTGCTCTTTCTCTTTGAGAACCAGCTAACTGGTGTTATACCAAACAAGTTTAGTAACTTGAGGAACCTGACAAGGCTGGATTTGTCGATTAATCGTCTTACAGGTTCAATTCCATCTGGATTCCAATATTTGACTCAAATGTCTCAGCTGCAGCTTTTTAACAACAACTTAAGTGGTGTTATCCCCCAGAGACTTGGACTTCATGGTCCTCTTTGGGTAGTTGATTTCTCTGATAACAACCTGACAGGAAGAATACCTCCTCATCTATGCTGGAATTCCCACTTGATGCTGTTGAACCTGGCATCTAACCAGCTTTATGGAAACATACCAACGGGGGTATTGAAATGCGATTCATTGGCACAGATGCTCTTGGTTGGAAACAGGTTCACTGGTGGCTTCCCTTCAGAATTGTGCAAACTGGTGAACTTTACTGCCATTGAGTTGAATGAGAATATGTTCAGTGGTCCAATTCCTCCTGAGATTGGGAACTGCAAGAAATTGCAAAGGCTTCACATTGCAAACAATTACTTCACATTGGAGTTGCCTAAGGAGATTGGAAATCTTTCTCAGTTGGTGACCTTCAATGTTTCATCAAATCTTTTCACTGGAAGAATTCCACCCGAAATTTTTAGGTGCCAAATGCTCCAAAGGCTTGATCTCAGTAAGAACAGCTTTACCGGCTCCTTGCCCAACGAGATTGGAACACTTCAATATTTGGAGATTCTCAAATTCTCTGGCAATGAACTATCTGGAAATATTCCTGCAGCAATAGGCAATCTATCGCATTTGATCCGGTTGCAGATGGATGGCAATATGTTTTCTGGTGAAATACCTCCTCAGTTGGGTTCTCTATCAAGCTTACAGATTGGAATGGATCTCAGTTACAATAACCTTTCTGGGAGAATACCAGCCAAGCTTGGCTATCTTAACATGCTTGAATATCTTTTCCTCAATAACAACCATTTGGATGGTGAAATTCCCAGCACATTTGATCAGCTCTCAAGCCTGCTGGGATGTAATTTCTCATACAATAACCTCTCCGGACCGATACCTTCGAATAAAATCTTCCAAAATATGGCTGTAAGCAGCTTCATTGGTGGTAACAAAGGCCTCTGCGGTGCACCTCTCAGTGACTGCAGCACTGACCCATCTTCTCGTTCCATTCCTCCAGTCAAAAGTGTTGATTCTCCCCGCGCCAAAATTGTCGTGATCATTGCATTGTCTGTTGGTGGTGTTTCCCTCGTTTTAATTTTAGTGATTTTATATGTTATGAGGCGGCCTATTGAGTCTGTCGGTCCCTTGAGGGACACAGAAGCTCCTTCCCCTGATTCAGATATCTATTTTCCTCCAAAGGAAGGATTCACATTCCAAGATCTAGTTGAAGCCACAAAAGGATTTCATGAAAGTTATGTGATTGGTAGGGGAGCATGTGGAACAGTTTATAAGGCAGTGATCAAATCTGGCAGGACCATTGCTGTTAAGAAGCTGGCATCTAACAGGGAGGGGAACAACATTGAGAATAGTTTCAGGGCAGAAATATTGACCCTGGGAAGAATTAGGCATAGAAATATAGTGAAGCTGTATGGTTTCTGCTATCACCAGGGTTCAAACCTCCTACTTTATGAGTACATGGAAAGGGGTAGCTTAGGTGAGCTATTGCATGGTTCTGCTAGTAATTTGGAATGGCCAATTCGGTTCATGATTGCTCTTGGAGCTGCTGAGGGTCTTGCCTACTTGCACCATGACTGCAAGCCAAAGATTATCCACCGTGATATAAAATCTAATAACATTCTGCTTGATGAAAATTTTGAGGCTCATGTTGGTGATTTTGGTTTGGCAAAAGTGATTGACATGCCCCAATCAAAATCCATGTCTGCAGTTGCTGGATCTTATGGGTATATTGCTCCTGAATATGCATATACCATGAAGGTCACAGAAAAGTGTGACATTTACAGCTATGGCGTTGTGCTCTTGGAACTCCTAACCGGAAGAGCTCCAGTTCAGCCACTGGAGCAAGGAGGGGACCTTGTCACATGGGTGAGAAACCATATTCGGAGACACAACAGCACATTGACAACAGGAATACTTGACAATCGTGTGGACCTTCAGGAACAAATAACTGTGAATCACATGCTCACTGTTTTGAAAATTGCTTTGCTTTGCACAAGCATGTCTCCTTCTGAGAGGCCATCAATGCCAGAAGTTGTGTTGATGCTTATTGAGTCTAATGAGCGAGAAGGGAACTTGACTCTCACTCAACCATACCATGATCTTCCTTCCAAAGATGGCAAGTGA 3348 0.4194 MSGNNKEGRALPDGYSVILLLLLLCLLLCSTEGLNTEGQILLEFKNGFDDKSNLLGNWRSTDATPCRWVGVDCTYEYNSNNDPVVMSLNLSSMGLSGALNGSSIGRLTHLTYLNLAYNSLTGNIPKEIGDCLSLESLYLNNNQFEGLIPPELGKLSSLKSLNICNNKLSGVLPAELGNLSSLVELVAYSNFLIGPLPNTIGNLKNLVTFRAGANNITGILPKEIGGCKSLMYLGLAQNQIGGKLPSEIGMLENLTELILWENQLSGSIPKELGNCSSLETLALYSNDLVGPIPPEIGNLKSLKKLYLYKNNLSGSITGEIGNLSSALEIDFSENSLVGDIPSEFSKISGLRLLFLFENQLTGVIPNKFSNLRNLTRLDLSINRLTGSIPSGFQYLTQMSQLQLFNNNLSGVIPQRLGLHGPLWVVDFSDNNLTGRIPPHLCWNSHLMLLNLASNQLYGNIPTGVLKCDSLAQMLLVGNRFTGGFPSELCKLVNFTAIELNENMFSGPIPPEIGNCKKLQRLHIANNYFTLELPKEIGNLSQLVTFNVSSNLFTGRIPPEIFRCQMLQRLDLSKNSFTGSLPNEIGTLQYLEILKFSGNELSGNIPAAIGNLSHLIRLQMDGNMFSGEIPPQLGSLSSLQIGMDLSYNNLSGRIPAKLGYLNMLEYLFLNNNHLDGEIPSTFDQLSSLLGCNFSYNNLSGPIPSNKIFQNMAVSSFIGGNKGLCGAPLSDCSTDPSSRSIPPVKSVDSPRAKIVVIIALSVGGVSLVLILVILYVMRRPIESVGPLRDTEAPSPDSDIYFPPKEGFTFQDLVEATKGFHESYVIGRGACGTVYKAVIKSGRTIAVKKLASNREGNNIENSFRAEILTLGRIRHRNIVKLYGFCYHQGSNLLLYEYMERGSLGELLHGSASNLEWPIRFMIALGAAEGLAYLHHDCKPKIIHRDIKSNNILLDENFEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLEQGGDLVTWVRNHIRRHNSTLTTGILDNRVDLQEQITVNHMLTVLKIALLCTSMSPSERPSMPEVVLMLIESNEREGNLTLTQPYHDLPSKDGK* 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1005 1115 Pfam Leucine rich repeat 349 408 IPR001611 GO:0005515
Dod07g1005 1115 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 17 1101 - -
Dod07g1005 1115 ProSitePatterns Serine/Threonine protein kinases active-site signature. 938 950 IPR008271 GO:0004672|GO:0006468
Dod07g1005 1115 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 17 1101 - -
Dod07g1005 1115 SMART LRR_typ_2 299 323 IPR003591 -
Dod07g1005 1115 SMART LRR_typ_2 107 131 IPR003591 -
Dod07g1005 1115 SMART LRR_typ_2 539 563 IPR003591 -
Dod07g1005 1115 SMART LRR_typ_2 611 635 IPR003591 -
Dod07g1005 1115 SMART LRR_typ_2 251 275 IPR003591 -
Dod07g1005 1115 SMART LRR_typ_2 371 394 IPR003591 -
Dod07g1005 1115 SMART LRR_typ_2 660 683 IPR003591 -
Dod07g1005 1115 SMART LRR_typ_2 395 419 IPR003591 -
Dod07g1005 1115 SMART LRR_typ_2 155 178 IPR003591 -
Dod07g1005 1115 Pfam Protein kinase domain 818 1087 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1005 1115 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
Dod07g1005 1115 Gene3D Phosphorylase Kinase; domain 1 788 894 - -
Dod07g1005 1115 SUPERFAMILY L domain-like 467 729 - -
Dod07g1005 1115 Pfam Leucine Rich Repeat 133 155 IPR001611 GO:0005515
Dod07g1005 1115 Pfam Leucine Rich Repeat 157 179 IPR001611 GO:0005515
Dod07g1005 1115 SUPERFAMILY Protein kinase-like (PK-like) 794 1090 IPR011009 -
Dod07g1005 1115 SMART serkin_6 817 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1005 1115 Gene3D Ribonuclease Inhibitor 192 291 IPR032675 -
Dod07g1005 1115 Gene3D Ribonuclease Inhibitor 292 394 IPR032675 -
Dod07g1005 1115 Gene3D Ribonuclease Inhibitor 416 734 IPR032675 -
Dod07g1005 1115 SUPERFAMILY L domain-like 283 461 - -
Dod07g1005 1115 Gene3D Transferase(Phosphotransferase) domain 1 895 1105 - -
Dod07g1005 1115 Gene3D Ribonuclease Inhibitor 33 191 IPR032675 -
Dod07g1005 1115 ProSiteProfiles Protein kinase domain profile. 817 1107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g1005 1115 SUPERFAMILY L domain-like 36 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1005 Dod-Chr7 17797076 17802802 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1005 34 1092 Receptor kinase-like Gene Family AT4G26540 38.626 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod07g1005 Pkinase 7.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1005 - - gmx:100807838 1738.01